RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 COG3Q96JB2 828 aa25.85■■□□□ 1.73
SMIM3-201ENST00000526627 ITSN1Q15811 1721 aa25.84■■□□□ 1.73
SMIM3-201ENST00000526627 UBR1Q8IWV7 1749 aa25.84■■□□□ 1.73
SMIM3-201ENST00000526627 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
SMIM3-201ENST00000526627 RRS1Q15050 365 aaKnown RBP25.83■■□□□ 1.73
SMIM3-201ENST00000526627 TSPYL6Q8N831 410 aa25.83■■□□□ 1.73
SMIM3-201ENST00000526627 ESF1Q9H501 851 aaKnown RBP25.83■■□□□ 1.73
SMIM3-201ENST00000526627 IFT57Q9NWB7 429 aa25.83■■□□□ 1.73
SMIM3-201ENST00000526627 TMEM2Q9UHN6 1383 aa25.83■■□□□ 1.73
SMIM3-201ENST00000526627 MRPL50Q8N5N7 158 aaKnown RBP25.83■■□□□ 1.73
SMIM3-201ENST00000526627 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
SMIM3-201ENST00000526627 CALD1Q05682 793 aaKnown RBP25.82■■□□□ 1.72
SMIM3-201ENST00000526627 ROBO2Q9HCK4 1378 aa25.82■■□□□ 1.72
SMIM3-201ENST00000526627 UPF2Q9HAU5 1272 aaKnown RBP25.82■■□□□ 1.72
SMIM3-201ENST00000526627 FRAT2O75474 233 aaPredicted RBP25.81■■□□□ 1.72
SMIM3-201ENST00000526627 BECN1Q14457 450 aa25.81■■□□□ 1.72
SMIM3-201ENST00000526627 PTCH1Q13635 1447 aa25.81■■□□□ 1.72
SMIM3-201ENST00000526627 ADAMTS13Q76LX8 1427 aa25.81■■□□□ 1.72
SMIM3-201ENST00000526627 GNAI1P63096 354 aa25.81■■□□□ 1.72
SMIM3-201ENST00000526627 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
SMIM3-201ENST00000526627 PIK3R4Q99570 1358 aa25.8■■□□□ 1.72
SMIM3-201ENST00000526627 ZNF692Q9BU19 519 aaPredicted RBP25.79■■□□□ 1.72
SMIM3-201ENST00000526627 ARHGAP45Q92619 1136 aa25.79■■□□□ 1.72
SMIM3-201ENST00000526627 NRKQ7Z2Y5 1582 aa25.78■■□□□ 1.72
SMIM3-201ENST00000526627 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.78■■□□□ 1.72
SMIM3-201ENST00000526627 GSE1Q14687 1217 aa25.77■■□□□ 1.72
SMIM3-201ENST00000526627 ZBTB7BO15156 539 aaPredicted RBP25.77■■□□□ 1.72
SMIM3-201ENST00000526627 NUCB1Q02818 461 aa25.77■■□□□ 1.72
SMIM3-201ENST00000526627 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
SMIM3-201ENST00000526627 TBC1D2Q9BYX2 928 aa25.75■■□□□ 1.71
SMIM3-201ENST00000526627 TOPAZ1Q8N9V7 1692 aa25.75■■□□□ 1.71
SMIM3-201ENST00000526627 ANTXR1Q9H6X2 564 aa25.75■■□□□ 1.71
SMIM3-201ENST00000526627 LMOD3Q0VAK6 560 aa25.74■■□□□ 1.71
SMIM3-201ENST00000526627 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
SMIM3-201ENST00000526627 C8orf58Q8NAV2 365 aa25.74■■□□□ 1.71
SMIM3-201ENST00000526627 ELL2O00472 640 aaPredicted RBP25.73■■□□□ 1.71
SMIM3-201ENST00000526627 ABCC4O15439 1325 aa25.73■■□□□ 1.71
SMIM3-201ENST00000526627 TTC21BQ7Z4L5 1316 aa25.72■■□□□ 1.71
SMIM3-201ENST00000526627 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
SMIM3-201ENST00000526627 OVOS2A0A0J9YW53 1432 aa25.71■■□□□ 1.71
SMIM3-201ENST00000526627 OVOS2Q6IE36 1432 aa25.71■■□□□ 1.71
SMIM3-201ENST00000526627 LTKP29376 864 aa25.71■■□□□ 1.71
SMIM3-201ENST00000526627 EIF4A2Q14240 407 aaKnown RBP25.7■■□□□ 1.71
SMIM3-201ENST00000526627 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.7
SMIM3-201ENST00000526627 DCTN1Q14203 1278 aa25.7■■□□□ 1.7
SMIM3-201ENST00000526627 C22orf23Q9BZE7 217 aa25.7■■□□□ 1.7
SMIM3-201ENST00000526627 LNPKQ9C0E8 428 aa25.7■■□□□ 1.7
SMIM3-201ENST00000526627 SLKQ9H2G2 1235 aaPredicted RBP25.7■■□□□ 1.7
SMIM3-201ENST00000526627 ACEP12821 1306 aa25.69■■□□□ 1.7
SMIM3-201ENST00000526627 MFAP1P55081 439 aaKnown RBP25.69■■□□□ 1.7
SMIM3-201ENST00000526627 CHD1LQ86WJ1 897 aa25.69■■□□□ 1.7
SMIM3-201ENST00000526627 AEBP1Q8IUX7 1158 aa25.69■■□□□ 1.7
SMIM3-201ENST00000526627 PLEKHG3A1L390 1219 aa25.69■■□□□ 1.7
SMIM3-201ENST00000526627 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
SMIM3-201ENST00000526627 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
SMIM3-201ENST00000526627 NALCNQ8IZF0 1738 aa25.67■■□□□ 1.7
SMIM3-201ENST00000526627 PEAK1Q9H792 1746 aa25.67■■□□□ 1.7
SMIM3-201ENST00000526627 SIRT2Q8IXJ6 389 aa25.66■■□□□ 1.7
SMIM3-201ENST00000526627 USP6P35125 1406 aa25.66■■□□□ 1.7
SMIM3-201ENST00000526627 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
SMIM3-201ENST00000526627 SULT6B1Q6IMI4 303 aa25.65■■□□□ 1.7
SMIM3-201ENST00000526627 RGPD1P0DJD0 1748 aa25.64■■□□□ 1.7
SMIM3-201ENST00000526627 GCC1Q96CN9 775 aa25.64■■□□□ 1.69
SMIM3-201ENST00000526627 USP31Q70CQ4 1352 aa25.63■■□□□ 1.69
SMIM3-201ENST00000526627 SSH2Q76I76 1423 aa25.63■■□□□ 1.69
SMIM3-201ENST00000526627 NUTM2FA1L443 756 aa25.63■■□□□ 1.69
SMIM3-201ENST00000526627 API5Q9BZZ5 524 aaKnown RBP25.62■■□□□ 1.69
SMIM3-201ENST00000526627 ANKRD45Q5TZF3 282 aa25.61■■□□□ 1.69
SMIM3-201ENST00000526627 HSP90AB2PQ58FF8 381 aa25.6■■□□□ 1.69
SMIM3-201ENST00000526627 BMP2KLQ5H9B9 411 aa25.6■■□□□ 1.69
SMIM3-201ENST00000526627 SLC26A8Q96RN1 970 aa25.59■■□□□ 1.69
SMIM3-201ENST00000526627 KIF24Q5T7B8 1368 aa25.59■■□□□ 1.69
SMIM3-201ENST00000526627 CHL1O00533 1208 aa25.58■■□□□ 1.69
SMIM3-201ENST00000526627 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.68
SMIM3-201ENST00000526627 KRT24Q2M2I5 525 aa25.58■■□□□ 1.68
SMIM3-201ENST00000526627 IL27Q8NEV9 243 aa25.58■■□□□ 1.68
SMIM3-201ENST00000526627 RBM25P49756 843 aaKnown RBP25.57■■□□□ 1.68
SMIM3-201ENST00000526627 RGS12O14924 1447 aa25.57■■□□□ 1.68
SMIM3-201ENST00000526627 MCM10Q7L590 875 aa25.56■■□□□ 1.68
SMIM3-201ENST00000526627 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
SMIM3-201ENST00000526627 INTS3Q68E01 1043 aaKnown RBP25.54■■□□□ 1.68
SMIM3-201ENST00000526627 SLIT1O75093 1534 aa25.54■■□□□ 1.68
SMIM3-201ENST00000526627 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
SMIM3-201ENST00000526627 CRB1P82279 1406 aa25.53■■□□□ 1.68
SMIM3-201ENST00000526627 SPRYD3Q8NCJ5 442 aa25.53■■□□□ 1.68
SMIM3-201ENST00000526627 AMOTL2Q9Y2J4 779 aa25.53■■□□□ 1.68
SMIM3-201ENST00000526627 MAP3K19Q56UN5 1328 aa25.51■■□□□ 1.67
SMIM3-201ENST00000526627 ARHGEF10O15013 1369 aa25.51■■□□□ 1.67
SMIM3-201ENST00000526627 FMN2Q9NZ56 1722 aa25.51■■□□□ 1.67
SMIM3-201ENST00000526627 TTC21AQ8NDW8 1320 aa25.51■■□□□ 1.67
SMIM3-201ENST00000526627 EID1Q9Y6B2 187 aa25.51■■□□□ 1.67
SMIM3-201ENST00000526627 TBX22Q9Y458 520 aa25.5■■□□□ 1.67
SMIM3-201ENST00000526627 SOX12O15370 315 aa25.49■■□□□ 1.67
SMIM3-201ENST00000526627 ATP10DQ9P241 1426 aa25.49■■□□□ 1.67
SMIM3-201ENST00000526627 BRPF3Q9ULD4 1205 aa25.49■■□□□ 1.67
SMIM3-201ENST00000526627 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
SMIM3-201ENST00000526627 RGPD8O14715 1765 aaPredicted RBP25.49■■□□□ 1.67
SMIM3-201ENST00000526627 NCOA3Q9Y6Q9 1424 aa25.48■■□□□ 1.67
SMIM3-201ENST00000526627 DCTPP1Q9H773 170 aa25.48■■□□□ 1.67
SMIM3-201ENST00000526627 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms