RNA–Protein interactions for RNA: ENST00000526520.5

NPIPA3-201, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 954 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-201ENST00000526520 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
NPIPA3-201ENST00000526520 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
NPIPA3-201ENST00000526520 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
NPIPA3-201ENST00000526520 MST1RQ04912 1400 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 FANCIQ9NVI1 1328 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 RARSP54136 660 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-201ENST00000526520 KDRP35968 1356 aa12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 ATF3P18847 181 aa12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
NPIPA3-201ENST00000526520 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
NPIPA3-201ENST00000526520 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
NPIPA3-201ENST00000526520 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
NPIPA3-201ENST00000526520 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 HMOX1P09601 288 aa12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 CENPQQ7L2Z9 268 aaPredicted RBP12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
NPIPA3-201ENST00000526520 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
NPIPA3-201ENST00000526520 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
NPIPA3-201ENST00000526520 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
NPIPA3-201ENST00000526520 MSH6P52701 1360 aa12.42□□□□□ -0.42
NPIPA3-201ENST00000526520 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 PLIN1O60240 522 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 HOXC9P31274 260 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 IP6K1Q92551 441 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
NPIPA3-201ENST00000526520 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 BCAR3O75815 825 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 FBLN1P23142 703 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
NPIPA3-201ENST00000526520 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
NPIPA3-201ENST00000526520 SLIT3O75094 1523 aa12.39□□□□□ -0.43
NPIPA3-201ENST00000526520 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
NPIPA3-201ENST00000526520 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
NPIPA3-201ENST00000526520 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
NPIPA3-201ENST00000526520 USP19O94966 1318 aa12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 KRT28Q7Z3Y7 464 aa12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 RGPD8O14715 1765 aaPredicted RBP12.38□□□□□ -0.43
NPIPA3-201ENST00000526520 NFAT5O94916 1531 aa12.37□□□□□ -0.43
NPIPA3-201ENST00000526520 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
NPIPA3-201ENST00000526520 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
NPIPA3-201ENST00000526520 ABCC6O95255 1503 aa12.37□□□□□ -0.43
NPIPA3-201ENST00000526520 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
NPIPA3-201ENST00000526520 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
NPIPA3-201ENST00000526520 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
NPIPA3-201ENST00000526520 EYA1Q99502 592 aa12.36□□□□□ -0.43
NPIPA3-201ENST00000526520 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
NPIPA3-201ENST00000526520 FOXO3O43524 673 aa12.35□□□□□ -0.43
NPIPA3-201ENST00000526520 GCP02774 474 aa12.35□□□□□ -0.43
NPIPA3-201ENST00000526520 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
NPIPA3-201ENST00000526520 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
NPIPA3-201ENST00000526520 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
NPIPA3-201ENST00000526520 CHL1O00533 1208 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 SOX12O15370 315 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 API5Q9BZZ5 524 aaKnown RBP12.34□□□□□ -0.43
NPIPA3-201ENST00000526520 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 RWDD1Q9H446 243 aaPredicted RBP12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
NPIPA3-201ENST00000526520 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
NPIPA3-201ENST00000526520 VAMP4O75379 141 aa12.32□□□□□ -0.44
NPIPA3-201ENST00000526520 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 MTHFSDQ2M296 383 aaKnown RBP12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
NPIPA3-201ENST00000526520 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms