RNA–Protein interactions for RNA: ENST00000525980.5

NUP214-215, Transcript of nucleoporin 214, human

TSL 2

Gene NUP214, Length 2,274 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-215	ENST00000525980	GNAI1	P63096	354 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	SKAP1	Q86WV1	359 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	SSH1	Q8WYL5	1049 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	SLC26A8	Q96RN1	970 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	ZRANB1	Q9UGI0	708 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	AMOTL2	Q9Y2J4	779 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	TTC21A	Q8NDW8	1320 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	RIMS1	Q86UR5	1692 aa	Known RBP	11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	HMOX1	P09601	288 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	RGS3	P49796	1198 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	BRPF1	P55201	1214 aa	Predicted RBP	11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	ATF7IP	Q6VMQ6	1270 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	IFT57	Q9NWB7	429 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	DDX19B	Q9UMR2	479 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	PIK3R4	Q99570	1358 aa		11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	XRN1	Q8IZH2	1706 aa	Known RBP	11.3	□□□□□ -0.6
NUP214-215	ENST00000525980	PRKCSH	P14314	528 aa	Predicted RBP	11.29	□□□□□ -0.6
NUP214-215	ENST00000525980	C8orf34	Q49A92	452 aa		11.29	□□□□□ -0.6
NUP214-215	ENST00000525980	USP31	Q70CQ4	1352 aa		11.29	□□□□□ -0.6
NUP214-215	ENST00000525980	RRS1	Q15050	365 aa	Known RBP	11.29	□□□□□ -0.6
NUP214-215	ENST00000525980	VIRMA	Q69YN4	1812 aa	Known RBP	11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	SSH2	Q76I76	1423 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	TRIM27	P14373	513 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	PHACTR3	Q96KR7	559 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	ANKAR	Q7Z5J8	1434 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	TNN	Q9UQP3	1299 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	PCDHB15	Q9Y5E8	787 aa		11.28	□□□□□ -0.6
NUP214-215	ENST00000525980	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.27	□□□□□ -0.6
NUP214-215	ENST00000525980	CHMP4B	Q9H444	224 aa	Known RBP	11.27	□□□□□ -0.61
NUP214-215	ENST00000525980	NOB1	Q9ULX3	412 aa	Known RBP	11.26	□□□□□ -0.61
NUP214-215	ENST00000525980	ZNF853	P0CG23	659 aa		11.26	□□□□□ -0.61
NUP214-215	ENST00000525980	ITPRIP	Q8IWB1	547 aa		11.26	□□□□□ -0.61
NUP214-215	ENST00000525980	DLG5	Q8TDM6	1919 aa		11.26	□□□□□ -0.61
NUP214-215	ENST00000525980	HDAC1	Q13547	482 aa	Predicted RBP	11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	EIF4A2	Q14240	407 aa	Known RBP	11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	ARHGAP45	Q92619	1136 aa		11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	CFAP44	Q96MT7	982 aa		11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	LAS1L	Q9Y4W2	734 aa	Known RBP	11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	HAP1	P54257	671 aa	Predicted RBP	11.25	□□□□□ -0.61
NUP214-215	ENST00000525980	RGPD1	P0DJD0	1748 aa		11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	TRH	P20396	242 aa	Predicted RBP	11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	NUTM2F	A1L443	756 aa		11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	VAMP4	O75379	141 aa		11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	NGDN	Q8NEJ9	315 aa	Known RBP	11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	ARHGEF10	O15013	1369 aa		11.24	□□□□□ -0.61
NUP214-215	ENST00000525980	PEAK1	Q9H792	1746 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	PLPPR3	Q6T4P5	718 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	MBIP	Q9NS73	344 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	SBNO1	A3KN83	1393 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	FLT4	P35916	1363 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	FMN2	Q9NZ56	1722 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	ZNF142	P52746	1687 aa	Predicted RBP	11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	SULT6B1	Q6IMI4	303 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	TMEM57	Q8N5G2	664 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	PDZRN3	Q9UPQ7	1066 aa		11.23	□□□□□ -0.61
NUP214-215	ENST00000525980	MRPL50	Q8N5N7	158 aa	Known RBP	11.22	□□□□□ -0.61
NUP214-215	ENST00000525980	ZBTB40	Q9NUA8	1239 aa		11.22	□□□□□ -0.61
NUP214-215	ENST00000525980	KIF24	Q5T7B8	1368 aa		11.22	□□□□□ -0.61
NUP214-215	ENST00000525980	USP54	Q70EL1	1684 aa		11.22	□□□□□ -0.61
NUP214-215	ENST00000525980	TWISTNB	Q3B726	338 aa	Predicted RBP	11.21	□□□□□ -0.61
NUP214-215	ENST00000525980	THUMPD2	Q9BTF0	503 aa	Known RBP	11.21	□□□□□ -0.61
NUP214-215	ENST00000525980	DAXX	Q9UER7	740 aa	Predicted RBP	11.21	□□□□□ -0.61
NUP214-215	ENST00000525980	RGPD8	O14715	1765 aa	Predicted RBP	11.21	□□□□□ -0.61
NUP214-215	ENST00000525980	PIK3C2A	O00443	1686 aa		11.21	□□□□□ -0.62
NUP214-215	ENST00000525980	KCNA6	P17658	529 aa		11.2	□□□□□ -0.62
NUP214-215	ENST00000525980	ANKLE2	Q86XL3	938 aa		11.2	□□□□□ -0.62
NUP214-215	ENST00000525980	MAP3K19	Q56UN5	1328 aa		11.2	□□□□□ -0.62
NUP214-215	ENST00000525980	HSP90AB2P	Q58FF8	381 aa		11.2	□□□□□ -0.62
NUP214-215	ENST00000525980	API5	Q9BZZ5	524 aa	Known RBP	11.2	□□□□□ -0.62
NUP214-215	ENST00000525980	AEBP1	Q8IUX7	1158 aa		11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	SMC5	Q8IY18	1101 aa		11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	CHD2	O14647	1828 aa	Known RBP	11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	KDR	P35968	1356 aa		11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	KIAA0232	Q92628	1395 aa		11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	TSPYL6	Q8N831	410 aa		11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	UPF2	Q9HAU5	1272 aa	Known RBP	11.19	□□□□□ -0.62
NUP214-215	ENST00000525980	ABCC4	O15439	1325 aa		11.18	□□□□□ -0.62
NUP214-215	ENST00000525980	FAM83G	A6ND36	823 aa		11.18	□□□□□ -0.62
NUP214-215	ENST00000525980	AMPH	P49418	695 aa		11.18	□□□□□ -0.62
NUP214-215	ENST00000525980	RTL5	Q5HYW3	569 aa	Predicted RBP	11.18	□□□□□ -0.62
NUP214-215	ENST00000525980	CHL1	O00533	1208 aa		11.17	□□□□□ -0.62
NUP214-215	ENST00000525980	C8orf58	Q8NAV2	365 aa		11.17	□□□□□ -0.62
NUP214-215	ENST00000525980	IGSF1	Q8N6C5	1336 aa		11.17	□□□□□ -0.62
NUP214-215	ENST00000525980	SETD1B	Q9UPS6	1966 aa	Known RBP	11.17	□□□□□ -0.62
NUP214-215	ENST00000525980	ADAMTSL3	P82987	1691 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	NLRP6	P59044	892 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	GAS2L2	Q8NHY3	880 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	USP35	Q9P2H5	1018 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	ZBTB7B	O15156	539 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	SOX12	O15370	315 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	DCTN1	Q14203	1278 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	RTL1	A6NKG5	1358 aa		11.16	□□□□□ -0.62
NUP214-215	ENST00000525980	ELL2	O00472	640 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	HTATSF1	O43719	755 aa	Known RBP	11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	RTF1	Q92541	710 aa	Known RBP	11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	GCC1	Q96CN9	775 aa		11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	CRB1	P82279	1406 aa		11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	MARF1	Q9Y4F3	1742 aa	Known RBP	11.15	□□□□□ -0.62
NUP214-215	ENST00000525980	ADGRL3	Q9HAR2	1447 aa		11.14	□□□□□ -0.63
NUP214-215	ENST00000525980	USP19	O94966	1318 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms