RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
CASP4-204ENST00000524843 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
CASP4-204ENST00000524843 RGPD8O14715 1765 aaPredicted RBP9.67□□□□□ -0.86
CASP4-204ENST00000524843 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
CASP4-204ENST00000524843 MS4A1P11836 297 aa9.66□□□□□ -0.86
CASP4-204ENST00000524843 ZNF428Q96B54 188 aa9.66□□□□□ -0.86
CASP4-204ENST00000524843 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
CASP4-204ENST00000524843 PEAK1Q9H792 1746 aa9.65□□□□□ -0.86
CASP4-204ENST00000524843 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.86
CASP4-204ENST00000524843 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
CASP4-204ENST00000524843 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
CASP4-204ENST00000524843 PHRF1Q9P1Y6 1649 aaKnown RBP9.65□□□□□ -0.86
CASP4-204ENST00000524843 CRBNQ96SW2 442 aa9.65□□□□□ -0.86
CASP4-204ENST00000524843 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 FLT4P35916 1363 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 IL13P35225 146 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 NFE2L2Q16236 605 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 CENPQQ7L2Z9 268 aaPredicted RBP9.64□□□□□ -0.87
CASP4-204ENST00000524843 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 DLG5Q8TDM6 1919 aa9.64□□□□□ -0.87
CASP4-204ENST00000524843 FANCIQ9NVI1 1328 aa9.63□□□□□ -0.87
CASP4-204ENST00000524843 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
CASP4-204ENST00000524843 KCNA6P17658 529 aa9.63□□□□□ -0.87
CASP4-204ENST00000524843 CANXP27824 592 aaKnown RBP9.63□□□□□ -0.87
CASP4-204ENST00000524843 PROM2Q8N271 834 aa9.63□□□□□ -0.87
CASP4-204ENST00000524843 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
CASP4-204ENST00000524843 DCCP43146 1447 aa9.63□□□□□ -0.87
CASP4-204ENST00000524843 KIF16BQ96L93 1317 aa9.62□□□□□ -0.87
CASP4-204ENST00000524843 PRKAR2BP31323 418 aa9.62□□□□□ -0.87
CASP4-204ENST00000524843 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
CASP4-204ENST00000524843 NGDNQ8NEJ9 315 aaKnown RBP9.62□□□□□ -0.87
CASP4-204ENST00000524843 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
CASP4-204ENST00000524843 RRP7AQ9Y3A4 280 aaKnown RBP9.62□□□□□ -0.87
CASP4-204ENST00000524843 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
CASP4-204ENST00000524843 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
CASP4-204ENST00000524843 KDM2BQ8NHM5 1336 aa9.61□□□□□ -0.87
CASP4-204ENST00000524843 PLIN1O60240 522 aa9.61□□□□□ -0.87
CASP4-204ENST00000524843 RIPK4P57078 832 aa9.61□□□□□ -0.87
CASP4-204ENST00000524843 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
CASP4-204ENST00000524843 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
CASP4-204ENST00000524843 LRRC37A3O60309 1634 aa9.6□□□□□ -0.87
CASP4-204ENST00000524843 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
CASP4-204ENST00000524843 ALDH1L2Q3SY69 923 aa9.6□□□□□ -0.87
CASP4-204ENST00000524843 IFT57Q9NWB7 429 aa9.6□□□□□ -0.87
CASP4-204ENST00000524843 KDRP35968 1356 aa9.6□□□□□ -0.87
CASP4-204ENST00000524843 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 MST1RQ04912 1400 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
CASP4-204ENST00000524843 BRPF1P55201 1214 aaPredicted RBP9.59□□□□□ -0.87
CASP4-204ENST00000524843 GNAI1P63096 354 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 SLIT3O75094 1523 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 NFAT5O94916 1531 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 LTN1O94822 1766 aa9.59□□□□□ -0.87
CASP4-204ENST00000524843 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.88
CASP4-204ENST00000524843 BCAR3O75815 825 aa9.58□□□□□ -0.88
CASP4-204ENST00000524843 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
CASP4-204ENST00000524843 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
CASP4-204ENST00000524843 C20orf194Q5TEA3 1177 aa9.58□□□□□ -0.88
CASP4-204ENST00000524843 ZKSCAN2Q63HK3 967 aa9.58□□□□□ -0.88
CASP4-204ENST00000524843 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
CASP4-204ENST00000524843 TRPM3Q9HCF6 1732 aaPredicted RBP9.58□□□□□ -0.88
CASP4-204ENST00000524843 ABCC6O95255 1503 aa9.57□□□□□ -0.88
CASP4-204ENST00000524843 IPO8O15397 1037 aaKnown RBP9.57□□□□□ -0.88
CASP4-204ENST00000524843 PMFBP1Q8TBY8 1022 aa9.57□□□□□ -0.88
CASP4-204ENST00000524843 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
CASP4-204ENST00000524843 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
CASP4-204ENST00000524843 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
CASP4-204ENST00000524843 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
CASP4-204ENST00000524843 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
CASP4-204ENST00000524843 CAMTA1Q9Y6Y1 1673 aa9.56□□□□□ -0.88
CASP4-204ENST00000524843 LMTK3Q96Q04 1460 aa9.56□□□□□ -0.88
CASP4-204ENST00000524843 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
CASP4-204ENST00000524843 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
CASP4-204ENST00000524843 HMOX1P09601 288 aa9.55□□□□□ -0.88
CASP4-204ENST00000524843 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
CASP4-204ENST00000524843 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
CASP4-204ENST00000524843 FTSJ3Q8IY81 847 aaKnown RBP9.55□□□□□ -0.88
CASP4-204ENST00000524843 DZIP1LQ8IYY4 767 aaKnown RBP9.55□□□□□ -0.88
CASP4-204ENST00000524843 KIAA0232Q92628 1395 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 AMPHP49418 695 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
CASP4-204ENST00000524843 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 AKT1S1Q96B36 256 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 DDX19BQ9UMR2 479 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
CASP4-204ENST00000524843 SOS1Q07889 1333 aaPredicted RBP9.54□□□□□ -0.88
CASP4-204ENST00000524843 FAM208AQ9UK61 1670 aaKnown RBP9.53□□□□□ -0.88
CASP4-204ENST00000524843 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
CASP4-204ENST00000524843 NLRP6P59044 892 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 ATF7IPQ6VMQ6 1270 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 ARHGAP45Q92619 1136 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 TSR2Q969E8 191 aaKnown RBP9.53□□□□□ -0.88
CASP4-204ENST00000524843 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 MED1Q15648 1581 aaPredicted RBP9.53□□□□□ -0.88
CASP4-204ENST00000524843 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
CASP4-204ENST00000524843 OVOS2A0A0G2JMS6 1433 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms