RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 NUP160Q12769 1436 aa21.18■□□□□ 0.98
MACF1-227ENST00000524432 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
MACF1-227ENST00000524432 NEUROD6Q96NK8 337 aa21.17■□□□□ 0.98
MACF1-227ENST00000524432 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
MACF1-227ENST00000524432 FIBPO43427 364 aa21.17■□□□□ 0.98
MACF1-227ENST00000524432 SRGAP3O43295 1099 aa21.16■□□□□ 0.98
MACF1-227ENST00000524432 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
MACF1-227ENST00000524432 TBC1D9Q6ZT07 1266 aa21.16■□□□□ 0.98
MACF1-227ENST00000524432 CNTROBQ8N137 903 aa21.16■□□□□ 0.98
MACF1-227ENST00000524432 BICD2Q8TD16 824 aa21.16■□□□□ 0.98
MACF1-227ENST00000524432 ADGRL2O95490 1459 aa21.16■□□□□ 0.98
MACF1-227ENST00000524432 SRCIN1Q9C0H9 1055 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 SIL1Q9H173 461 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 POLR3AO14802 1390 aaPredicted RBP21.15■□□□□ 0.98
MACF1-227ENST00000524432 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 VSIG10Q8N0Z9 540 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 TSPYL6Q8N831 410 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 SSFA2P28290 1259 aa21.15■□□□□ 0.98
MACF1-227ENST00000524432 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.98
MACF1-227ENST00000524432 R3HCC1Q9Y3T6 440 aaKnown RBP21.14■□□□□ 0.98
MACF1-227ENST00000524432 USHBP1Q8N6Y0 703 aa21.14■□□□□ 0.97
MACF1-227ENST00000524432 FBXW7Q969H0 707 aa21.14■□□□□ 0.97
MACF1-227ENST00000524432 FSD1Q9BTV5 496 aa21.14■□□□□ 0.97
MACF1-227ENST00000524432 RNF20Q5VTR2 975 aa21.13■□□□□ 0.97
MACF1-227ENST00000524432 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
MACF1-227ENST00000524432 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
MACF1-227ENST00000524432 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
MACF1-227ENST00000524432 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
MACF1-227ENST00000524432 RBM42Q9BTD8 480 aaKnown RBP21.13■□□□□ 0.97
MACF1-227ENST00000524432 CIZ1Q9ULV3 898 aaPredicted RBP21.13■□□□□ 0.97
MACF1-227ENST00000524432 BECN2A8MW95 431 aa21.13■□□□□ 0.97
MACF1-227ENST00000524432 C8orf58Q8NAV2 365 aa21.12■□□□□ 0.97
MACF1-227ENST00000524432 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 KIF3AQ9Y496 699 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 PIK3C2GO75747 1445 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
MACF1-227ENST00000524432 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
MACF1-227ENST00000524432 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
MACF1-227ENST00000524432 GOLGA6L19H0YKK7 550 aa21.1■□□□□ 0.97
MACF1-227ENST00000524432 HDAC1Q13547 482 aaPredicted RBP21.1■□□□□ 0.97
MACF1-227ENST00000524432 BMP2KLQ5H9B9 411 aa21.1■□□□□ 0.97
MACF1-227ENST00000524432 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
MACF1-227ENST00000524432 DDX54Q8TDD1 881 aaKnown RBP21.1■□□□□ 0.97
MACF1-227ENST00000524432 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
MACF1-227ENST00000524432 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
MACF1-227ENST00000524432 ESPNB1AK53 854 aa21.09■□□□□ 0.97
MACF1-227ENST00000524432 MCM2P49736 904 aa21.09■□□□□ 0.97
MACF1-227ENST00000524432 C16orf71Q8IYS4 520 aaPredicted RBP21.09■□□□□ 0.97
MACF1-227ENST00000524432 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
MACF1-227ENST00000524432 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
MACF1-227ENST00000524432 MBD3O95983 291 aa21.08■□□□□ 0.97
MACF1-227ENST00000524432 NUCB1Q02818 461 aa21.08■□□□□ 0.97
MACF1-227ENST00000524432 LARP6Q9BRS8 491 aaKnown RBP21.08■□□□□ 0.96
MACF1-227ENST00000524432 APPP05067 770 aa21.08■□□□□ 0.96
MACF1-227ENST00000524432 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.08■□□□□ 0.96
MACF1-227ENST00000524432 DNAJC2Q99543 621 aaKnown RBP21.07■□□□□ 0.96
MACF1-227ENST00000524432 MYL6BP14649 208 aa21.07■□□□□ 0.96
MACF1-227ENST00000524432 NSD2O96028 1365 aa21.07■□□□□ 0.96
MACF1-227ENST00000524432 CREBRFQ8IUR6 639 aa21.07■□□□□ 0.96
MACF1-227ENST00000524432 ZNF592Q92610 1267 aa21.07■□□□□ 0.96
MACF1-227ENST00000524432 MEIS3Q99687 375 aa21.07■□□□□ 0.96
MACF1-227ENST00000524432 GNAT3A8MTJ3 354 aa21.06■□□□□ 0.96
MACF1-227ENST00000524432 EVA1CP58658 441 aa21.06■□□□□ 0.96
MACF1-227ENST00000524432 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
MACF1-227ENST00000524432 SYTL4Q96C24 671 aaPredicted RBP21.06■□□□□ 0.96
MACF1-227ENST00000524432 STK3Q13188 491 aa21.05■□□□□ 0.96
MACF1-227ENST00000524432 MX1P20591 662 aa21.05■□□□□ 0.96
MACF1-227ENST00000524432 ISY1Q9ULR0 285 aaKnown RBP21.05■□□□□ 0.96
MACF1-227ENST00000524432 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
MACF1-227ENST00000524432 ASXL2Q76L83 1435 aa21.05■□□□□ 0.96
MACF1-227ENST00000524432 IL16Q14005 1332 aa21.05■□□□□ 0.96
MACF1-227ENST00000524432 LRRFIP2Q9Y608 721 aaKnown RBP21.05■□□□□ 0.96
MACF1-227ENST00000524432 VAMP4O75379 141 aa21.04■□□□□ 0.96
MACF1-227ENST00000524432 PANK2Q9BZ23 570 aa21.04■□□□□ 0.96
MACF1-227ENST00000524432 CPLX1O14810 134 aa21.04■□□□□ 0.96
MACF1-227ENST00000524432 CDK11BP21127 795 aaKnown RBP21.04■□□□□ 0.96
MACF1-227ENST00000524432 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.04■□□□□ 0.96
MACF1-227ENST00000524432 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
MACF1-227ENST00000524432 CEBPZQ03701 1054 aaKnown RBP21.03■□□□□ 0.96
MACF1-227ENST00000524432 SYCE3A1L190 88 aa21.03■□□□□ 0.96
MACF1-227ENST00000524432 CCDC173Q0VFZ6 552 aa21.03■□□□□ 0.96
MACF1-227ENST00000524432 AMOTL2Q9Y2J4 779 aa21.03■□□□□ 0.96
MACF1-227ENST00000524432 KDM4AO75164 1064 aa21.03■□□□□ 0.96
MACF1-227ENST00000524432 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
MACF1-227ENST00000524432 ANXA1P04083 346 aa21.02■□□□□ 0.96
MACF1-227ENST00000524432 ZC3H6P61129 1189 aaKnown RBP21.02■□□□□ 0.96
MACF1-227ENST00000524432 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
MACF1-227ENST00000524432 A0A1W2PP64 1363 aa21.02■□□□□ 0.96
MACF1-227ENST00000524432 ACEP12821 1306 aa21.02■□□□□ 0.96
MACF1-227ENST00000524432 WASHC4Q2M389 1173 aa21.02■□□□□ 0.95
MACF1-227ENST00000524432 AACSQ86V21 672 aa21.02■□□□□ 0.95
MACF1-227ENST00000524432 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.95
MACF1-227ENST00000524432 TSPY26PQ9H489 355 aa21.01■□□□□ 0.95
MACF1-227ENST00000524432 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
MACF1-227ENST00000524432 TPM4P67936 248 aa21.01■□□□□ 0.95
MACF1-227ENST00000524432 FLIIQ13045 1269 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms