RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PDE3AQ14432 1141 aa23.91■■□□□ 1.42
TRAPPC9-210ENST00000521667 HSP90AB2PQ58FF8 381 aa23.91■■□□□ 1.42
TRAPPC9-210ENST00000521667 SBNO1A3KN83 1393 aa23.9■■□□□ 1.42
TRAPPC9-210ENST00000521667 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.42
TRAPPC9-210ENST00000521667 FLT4P35916 1363 aa23.88■■□□□ 1.41
TRAPPC9-210ENST00000521667 USP54Q70EL1 1684 aa23.88■■□□□ 1.41
TRAPPC9-210ENST00000521667 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
TRAPPC9-210ENST00000521667 RBM19Q9Y4C8 960 aaKnown RBP23.88■■□□□ 1.41
TRAPPC9-210ENST00000521667 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
TRAPPC9-210ENST00000521667 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 CALD1Q05682 793 aaKnown RBP23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 ESCO1Q5FWF5 840 aa23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 SULT6B1Q6IMI4 303 aa23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 TMEM94Q12767 1356 aa23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
TRAPPC9-210ENST00000521667 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
TRAPPC9-210ENST00000521667 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC9-210ENST00000521667 RGPD1P0DJD0 1748 aa23.85■■□□□ 1.41
TRAPPC9-210ENST00000521667 AMPHP49418 695 aa23.84■■□□□ 1.41
TRAPPC9-210ENST00000521667 NUTM2GQ5VZR2 741 aa23.84■■□□□ 1.41
TRAPPC9-210ENST00000521667 KIF24Q5T7B8 1368 aa23.83■■□□□ 1.41
TRAPPC9-210ENST00000521667 MARF1Q9Y4F3 1742 aaKnown RBP23.83■■□□□ 1.41
TRAPPC9-210ENST00000521667 ARHGEF10O15013 1369 aa23.83■■□□□ 1.4
TRAPPC9-210ENST00000521667 BCL2L13Q9BXK5 485 aa23.83■■□□□ 1.4
TRAPPC9-210ENST00000521667 PSME1Q06323 249 aa23.81■■□□□ 1.4
TRAPPC9-210ENST00000521667 ZNF335Q9H4Z2 1342 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC9-210ENST00000521667 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
TRAPPC9-210ENST00000521667 PANK1Q8TE04 598 aa23.8■■□□□ 1.4
TRAPPC9-210ENST00000521667 ORAI2Q96SN7 254 aa23.8■■□□□ 1.4
TRAPPC9-210ENST00000521667 THUMPD2Q9BTF0 503 aaKnown RBP23.8■■□□□ 1.4
TRAPPC9-210ENST00000521667 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
TRAPPC9-210ENST00000521667 GNAI1P63096 354 aa23.79■■□□□ 1.4
TRAPPC9-210ENST00000521667 KDM2BQ8NHM5 1336 aa23.79■■□□□ 1.4
TRAPPC9-210ENST00000521667 LAS1LQ9Y4W2 734 aaKnown RBP23.78■■□□□ 1.4
TRAPPC9-210ENST00000521667 XIRP1Q702N8 1843 aaKnown RBP23.78■■□□□ 1.4
TRAPPC9-210ENST00000521667 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
TRAPPC9-210ENST00000521667 COG6Q9Y2V7 657 aa23.77■■□□□ 1.4
TRAPPC9-210ENST00000521667 ZNF853P0CG23 659 aa23.77■■□□□ 1.4
TRAPPC9-210ENST00000521667 HOXC9P31274 260 aa23.77■■□□□ 1.4
TRAPPC9-210ENST00000521667 CENPQQ7L2Z9 268 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC9-210ENST00000521667 KDRP35968 1356 aa23.76■■□□□ 1.39
TRAPPC9-210ENST00000521667 IGSF1Q8N6C5 1336 aa23.76■■□□□ 1.39
TRAPPC9-210ENST00000521667 ZKSCAN2Q63HK3 967 aa23.76■■□□□ 1.39
TRAPPC9-210ENST00000521667 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
TRAPPC9-210ENST00000521667 DLG5Q8TDM6 1919 aa23.75■■□□□ 1.39
TRAPPC9-210ENST00000521667 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
TRAPPC9-210ENST00000521667 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 EYA1Q99502 592 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 FAM83GA6ND36 823 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 ATF3P18847 181 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 ZNF428Q96B54 188 aa23.74■■□□□ 1.39
TRAPPC9-210ENST00000521667 RLBP1P12271 317 aa23.73■■□□□ 1.39
TRAPPC9-210ENST00000521667 TNNQ9UQP3 1299 aa23.73■■□□□ 1.39
TRAPPC9-210ENST00000521667 TCERG1O14776 1098 aaKnown RBP23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 FOXO3O43524 673 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 MS4A1P11836 297 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 AAMPQ13685 434 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 ALDH1L2Q3SY69 923 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 XPCQ01831 940 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 MST1RQ04912 1400 aa23.72■■□□□ 1.39
TRAPPC9-210ENST00000521667 DCTN1Q14203 1278 aa23.71■■□□□ 1.39
TRAPPC9-210ENST00000521667 NFAT5O94916 1531 aa23.71■■□□□ 1.39
TRAPPC9-210ENST00000521667 KCNH5Q8NCM2 988 aa23.71■■□□□ 1.39
TRAPPC9-210ENST00000521667 DZIP1LQ8IYY4 767 aaKnown RBP23.69■■□□□ 1.38
TRAPPC9-210ENST00000521667 KIF1AQ12756 1690 aa23.69■■□□□ 1.38
TRAPPC9-210ENST00000521667 KIF16BQ96L93 1317 aa23.69■■□□□ 1.38
TRAPPC9-210ENST00000521667 MSH6P52701 1360 aa23.69■■□□□ 1.38
TRAPPC9-210ENST00000521667 DCCP43146 1447 aa23.68■■□□□ 1.38
TRAPPC9-210ENST00000521667 FTSJ3Q8IY81 847 aaKnown RBP23.68■■□□□ 1.38
TRAPPC9-210ENST00000521667 VAMP4O75379 141 aa23.67■■□□□ 1.38
TRAPPC9-210ENST00000521667 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
TRAPPC9-210ENST00000521667 ATF7IPQ6VMQ6 1270 aa23.67■■□□□ 1.38
TRAPPC9-210ENST00000521667 IP6K1Q92551 441 aa23.67■■□□□ 1.38
TRAPPC9-210ENST00000521667 NOB1Q9ULX3 412 aaKnown RBP23.67■■□□□ 1.38
TRAPPC9-210ENST00000521667 TRIM27P14373 513 aa23.66■■□□□ 1.38
TRAPPC9-210ENST00000521667 BRPF1P55201 1214 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC9-210ENST00000521667 MTHFSDQ2M296 383 aaKnown RBP23.66■■□□□ 1.38
TRAPPC9-210ENST00000521667 IPO8O15397 1037 aaKnown RBP23.66■■□□□ 1.38
TRAPPC9-210ENST00000521667 CADPS2Q86UW7 1296 aa23.66■■□□□ 1.38
TRAPPC9-210ENST00000521667 MCM10Q7L590 875 aa23.65■■□□□ 1.38
TRAPPC9-210ENST00000521667 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
TRAPPC9-210ENST00000521667 TSPYL6Q8N831 410 aa23.65■■□□□ 1.38
TRAPPC9-210ENST00000521667 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
TRAPPC9-210ENST00000521667 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
TRAPPC9-210ENST00000521667 LTN1O94822 1766 aa23.64■■□□□ 1.38
TRAPPC9-210ENST00000521667 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.38
TRAPPC9-210ENST00000521667 SLIT3O75094 1523 aa23.64■■□□□ 1.37
TRAPPC9-210ENST00000521667 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC9-210ENST00000521667 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC9-210ENST00000521667 CHL1O00533 1208 aa23.62■■□□□ 1.37
TRAPPC9-210ENST00000521667 C8orf58Q8NAV2 365 aa23.62■■□□□ 1.37
TRAPPC9-210ENST00000521667 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
TRAPPC9-210ENST00000521667 IGHDP01880 384 aa23.61■■□□□ 1.37
TRAPPC9-210ENST00000521667 GCP02774 474 aa23.61■■□□□ 1.37
TRAPPC9-210ENST00000521667 RTF1Q92541 710 aaKnown RBP23.61■■□□□ 1.37
TRAPPC9-210ENST00000521667 CRB1P82279 1406 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms