RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 CDCA7Q9BWT1 371 aaPredicted RBP14.72□□□□□ -0.05
PCDHGB6-201ENST00000520790 TSR2Q969E8 191 aaKnown RBP14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 NBPF6Q5VWK0 638 aa14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 NBPF4Q96M43 638 aa14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 PARP3Q9Y6F1 533 aa14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 API5Q9BZZ5 524 aaKnown RBP14.71□□□□□ -0.05
PCDHGB6-201ENST00000520790 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.06
PCDHGB6-201ENST00000520790 TRMT112Q9UI30 125 aaKnown RBP14.71□□□□□ -0.06
PCDHGB6-201ENST00000520790 FCHSD2O94868 740 aa14.7□□□□□ -0.06
PCDHGB6-201ENST00000520790 UBTFL1P0CB47 393 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB6-201ENST00000520790 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
PCDHGB6-201ENST00000520790 ANKIB1Q9P2G1 1089 aa14.7□□□□□ -0.06
PCDHGB6-201ENST00000520790 FBXO41Q8TF61 875 aa14.7□□□□□ -0.06
PCDHGB6-201ENST00000520790 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
PCDHGB6-201ENST00000520790 MSL1Q68DK7 614 aa14.69□□□□□ -0.06
PCDHGB6-201ENST00000520790 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB6-201ENST00000520790 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB6-201ENST00000520790 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 RBM6P78332 1123 aaKnown RBP14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 CCDC57Q2TAC2 916 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 METP08581 1390 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 CLSTN1O94985 981 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 NFATC2IPQ8NCF5 419 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
PCDHGB6-201ENST00000520790 PTPRMP28827 1452 aa14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 TRAPPC3LQ5T215 181 aa14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 FAM196AQ6ZSG2 479 aa14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 RWDD1Q9H446 243 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB6-201ENST00000520790 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 CFAP74Q9C0B2 1584 aa14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 UNC5CLQ8IV45 518 aa14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 MAP3K19Q56UN5 1328 aa14.66□□□□□ -0.06
PCDHGB6-201ENST00000520790 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 SIL1Q9H173 461 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 TTC37Q6PGP7 1564 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 ST5P78524 1137 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 NFE2L2Q16236 605 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 RILPL2Q969X0 211 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 PSDA5PKW4 1024 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 MTMR7Q9Y216 660 aa14.65□□□□□ -0.06
PCDHGB6-201ENST00000520790 IP6K1Q92551 441 aa14.65□□□□□ -0.07
PCDHGB6-201ENST00000520790 ADCY10Q96PN6 1610 aa14.64□□□□□ -0.07
PCDHGB6-201ENST00000520790 PLEKHG1Q9ULL1 1385 aa14.64□□□□□ -0.07
PCDHGB6-201ENST00000520790 PLEKHH1Q9ULM0 1364 aa14.64□□□□□ -0.07
PCDHGB6-201ENST00000520790 ANXA1P04083 346 aa14.64□□□□□ -0.07
PCDHGB6-201ENST00000520790 TRPM2O94759 1503 aa14.64□□□□□ -0.07
PCDHGB6-201ENST00000520790 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
PCDHGB6-201ENST00000520790 ZNF526Q8TF50 670 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB6-201ENST00000520790 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB6-201ENST00000520790 EFCAB6Q5THR3 1501 aa14.63□□□□□ -0.07
PCDHGB6-201ENST00000520790 A0A087WZG4 1122 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 BCS1LQ9Y276 419 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 HOXC9P31274 260 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 GNL3LQ9NVN8 582 aaKnown RBP14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 MBD5Q9P267 1494 aa14.62□□□□□ -0.07
PCDHGB6-201ENST00000520790 ATP5J2-PTCD1G3V325 749 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 GNL2Q13823 731 aaKnown RBP14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 IKQ13123 557 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 DUSP27Q5VZP5 1158 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 MYD88Q99836 296 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 TMOD2Q9NZR1 351 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 SURF6O75683 361 aaKnown RBP14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 ANKRD45Q5TZF3 282 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 EYA1Q99502 592 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 SHANK2Q9UPX8 1470 aa14.61□□□□□ -0.07
PCDHGB6-201ENST00000520790 SNRPA1P09661 255 aaKnown RBP14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 KCNQ4P56696 695 aa14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 MYO5CQ9NQX4 1742 aa14.6□□□□□ -0.07
PCDHGB6-201ENST00000520790 MCCP23508 829 aa14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 ATP2B2Q01814 1243 aa14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 JCADQ9P266 1359 aa14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 ILDR1Q86SU0 546 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 COL17A1Q9UMD9 1497 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 LRRFIP1Q32MZ4 808 aaKnown RBP14.59□□□□□ -0.07
PCDHGB6-201ENST00000520790 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms