RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 UNC13BO14795 1591 aa11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 RAPGEF3O95398 923 aa11.48□□□□□ -0.57
CTHRC1-203ENST00000520337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTHRC1-203ENST00000520337 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
CTHRC1-203ENST00000520337 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
CTHRC1-203ENST00000520337 ERBINQ96RT1 1412 aa11.48□□□□□ -0.57
CTHRC1-203ENST00000520337 DDX11L8A8MPP1 907 aa11.47□□□□□ -0.57
CTHRC1-203ENST00000520337 IRF6O14896 467 aa11.47□□□□□ -0.57
CTHRC1-203ENST00000520337 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
CTHRC1-203ENST00000520337 ABCA6Q8N139 1617 aa11.46□□□□□ -0.57
CTHRC1-203ENST00000520337 GFRA3O60609 400 aa11.46□□□□□ -0.57
CTHRC1-203ENST00000520337 DEPDC5O75140 1603 aa11.46□□□□□ -0.58
CTHRC1-203ENST00000520337 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 MAGI2Q86UL8 1455 aa11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 COL17A1Q9UMD9 1497 aaPredicted RBP11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 DHX29Q7Z478 1369 aaKnown RBP11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 IQGAP3Q86VI3 1631 aa11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
CTHRC1-203ENST00000520337 NUP155O75694 1391 aa11.44□□□□□ -0.58
CTHRC1-203ENST00000520337 BCORL1Q5H9F3 1711 aa11.44□□□□□ -0.58
CTHRC1-203ENST00000520337 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
CTHRC1-203ENST00000520337 DIP2CQ9Y2E4 1556 aa11.44□□□□□ -0.58
CTHRC1-203ENST00000520337 TLL1O43897 1013 aa11.43□□□□□ -0.58
CTHRC1-203ENST00000520337 ADH1BP00325 375 aa11.43□□□□□ -0.58
CTHRC1-203ENST00000520337 GCGRP47871 477 aa11.43□□□□□ -0.58
CTHRC1-203ENST00000520337 FAM135AQ9P2D6 1515 aa11.43□□□□□ -0.58
CTHRC1-203ENST00000520337 A2MP01023 1474 aa11.43□□□□□ -0.58
CTHRC1-203ENST00000520337 LMOD2Q6P5Q4 547 aa11.42□□□□□ -0.58
CTHRC1-203ENST00000520337 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
CTHRC1-203ENST00000520337 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
CTHRC1-203ENST00000520337 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
CTHRC1-203ENST00000520337 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
CTHRC1-203ENST00000520337 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
CTHRC1-203ENST00000520337 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
CTHRC1-203ENST00000520337 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
CTHRC1-203ENST00000520337 FUT2Q10981 343 aa11.4□□□□□ -0.58
CTHRC1-203ENST00000520337 CCDC102AQ96A19 550 aa11.4□□□□□ -0.58
CTHRC1-203ENST00000520337 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
CTHRC1-203ENST00000520337 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
CTHRC1-203ENST00000520337 MORN1Q5T089 497 aa11.39□□□□□ -0.59
CTHRC1-203ENST00000520337 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
CTHRC1-203ENST00000520337 KIF3BO15066 747 aa11.38□□□□□ -0.59
CTHRC1-203ENST00000520337 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
CTHRC1-203ENST00000520337 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
CTHRC1-203ENST00000520337 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
CTHRC1-203ENST00000520337 E9PCH4 1651 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 TET3O43151 1660 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 S1PR4O95977 384 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 SLC6A16Q9GZN6 736 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 SIGLEC1Q9BZZ2 1709 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 ATP10AO60312 1499 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
CTHRC1-203ENST00000520337 CEP152O94986 1710 aa11.36□□□□□ -0.59
CTHRC1-203ENST00000520337 CD46P15529 392 aa11.36□□□□□ -0.59
CTHRC1-203ENST00000520337 SPSB2Q99619 263 aa11.36□□□□□ -0.59
CTHRC1-203ENST00000520337 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
CTHRC1-203ENST00000520337 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
CTHRC1-203ENST00000520337 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
CTHRC1-203ENST00000520337 CLCN1P35523 988 aa11.35□□□□□ -0.59
CTHRC1-203ENST00000520337 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
CTHRC1-203ENST00000520337 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
CTHRC1-203ENST00000520337 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
CTHRC1-203ENST00000520337 NRG2O14511 850 aaPredicted RBP11.34□□□□□ -0.59
CTHRC1-203ENST00000520337 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
CTHRC1-203ENST00000520337 ARHGEF40Q8TER5 1519 aa11.34□□□□□ -0.59
CTHRC1-203ENST00000520337 BCANQ96GW7 911 aa11.33□□□□□ -0.6
CTHRC1-203ENST00000520337 AGLP35573 1532 aa11.33□□□□□ -0.6
CTHRC1-203ENST00000520337 LMTK2Q8IWU2 1503 aa11.33□□□□□ -0.6
CTHRC1-203ENST00000520337 KANK1Q14678 1352 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 ZMYND10O75800 440 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
CTHRC1-203ENST00000520337 PPP1R15AO75807 674 aaPredicted RBP11.31□□□□□ -0.6
CTHRC1-203ENST00000520337 SLC19A1P41440 591 aa11.31□□□□□ -0.6
CTHRC1-203ENST00000520337 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
CTHRC1-203ENST00000520337 ABCC3O15438 1527 aa11.3□□□□□ -0.6
CTHRC1-203ENST00000520337 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
CTHRC1-203ENST00000520337 KDM4AO75164 1064 aa11.3□□□□□ -0.6
CTHRC1-203ENST00000520337 USP46P62068 366 aa11.3□□□□□ -0.6
CTHRC1-203ENST00000520337 GGT6Q6P531 493 aa11.3□□□□□ -0.6
CTHRC1-203ENST00000520337 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 PTPRTO14522 1441 aa11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 CAMSAP1Q5T5Y3 1602 aa11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 Q3C1V9 767 aa11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 ZC3H15Q8WU90 426 aaKnown RBP11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
CTHRC1-203ENST00000520337 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
CTHRC1-203ENST00000520337 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CTHRC1-203ENST00000520337 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
CTHRC1-203ENST00000520337 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
CTHRC1-203ENST00000520337 TRPM2O94759 1503 aa11.27□□□□□ -0.61
CTHRC1-203ENST00000520337 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms