RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 USP31Q70CQ4 1352 aa10.83□□□□□ -0.68
HMGB4-203ENST00000519684 ANP32AP39687 249 aaKnown RBP10.83□□□□□ -0.68
HMGB4-203ENST00000519684 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
HMGB4-203ENST00000519684 FTSJ3Q8IY81 847 aaKnown RBP10.82□□□□□ -0.68
HMGB4-203ENST00000519684 PHACTR3Q96KR7 559 aa10.82□□□□□ -0.68
HMGB4-203ENST00000519684 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
HMGB4-203ENST00000519684 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
HMGB4-203ENST00000519684 PEAK1Q9H792 1746 aa10.81□□□□□ -0.68
HMGB4-203ENST00000519684 PDE4AP27815 886 aa10.81□□□□□ -0.68
HMGB4-203ENST00000519684 GNAI1P63096 354 aa10.8□□□□□ -0.68
HMGB4-203ENST00000519684 EIF4A2Q14240 407 aaKnown RBP10.8□□□□□ -0.68
HMGB4-203ENST00000519684 PIK3C2AO00443 1686 aa10.8□□□□□ -0.68
HMGB4-203ENST00000519684 SETD1BQ9UPS6 1966 aaKnown RBP10.8□□□□□ -0.68
HMGB4-203ENST00000519684 SOX12O15370 315 aa10.8□□□□□ -0.68
HMGB4-203ENST00000519684 DZIP1LQ8IYY4 767 aaKnown RBP10.8□□□□□ -0.68
HMGB4-203ENST00000519684 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
HMGB4-203ENST00000519684 KIF16BQ96L93 1317 aa10.8□□□□□ -0.68
HMGB4-203ENST00000519684 ZNF428Q96B54 188 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 BACH2Q9BYV9 841 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 RGPD1P0DJD0 1748 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
HMGB4-203ENST00000519684 MVPQ14764 893 aaKnown RBP10.79□□□□□ -0.68
HMGB4-203ENST00000519684 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 SSH1Q8WYL5 1049 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 SBNO1A3KN83 1393 aa10.79□□□□□ -0.68
HMGB4-203ENST00000519684 RLBP1P12271 317 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 FLT4P35916 1363 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
HMGB4-203ENST00000519684 USP54Q70EL1 1684 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 MSH5O43196 834 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 TNNQ9UQP3 1299 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
HMGB4-203ENST00000519684 AMPHP49418 695 aa10.77□□□□□ -0.69
HMGB4-203ENST00000519684 ATF7IPQ6VMQ6 1270 aa10.77□□□□□ -0.69
HMGB4-203ENST00000519684 SKAP1Q86WV1 359 aa10.77□□□□□ -0.69
HMGB4-203ENST00000519684 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
HMGB4-203ENST00000519684 ANP32EQ9BTT0 268 aa10.77□□□□□ -0.69
HMGB4-203ENST00000519684 MAP3K19Q56UN5 1328 aa10.77□□□□□ -0.69
HMGB4-203ENST00000519684 IGHDP01880 384 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 NLRP6P59044 892 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 HSP90AB2PQ58FF8 381 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 NOB1Q9ULX3 412 aaKnown RBP10.76□□□□□ -0.69
HMGB4-203ENST00000519684 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 TRIM27P14373 513 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 AEBP1Q8IUX7 1158 aa10.76□□□□□ -0.69
HMGB4-203ENST00000519684 RWDD1Q9H446 243 aaPredicted RBP10.76□□□□□ -0.69
HMGB4-203ENST00000519684 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
HMGB4-203ENST00000519684 RGS3P49796 1198 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 ITPRIPQ8IWB1 547 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 PHF8Q9UPP1 1060 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
HMGB4-203ENST00000519684 ZNF853P0CG23 659 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
HMGB4-203ENST00000519684 KIF24Q5T7B8 1368 aa10.74□□□□□ -0.69
HMGB4-203ENST00000519684 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
HMGB4-203ENST00000519684 NPM2Q86SE8 214 aaKnown RBP10.74□□□□□ -0.69
HMGB4-203ENST00000519684 ABTB2Q8N961 1025 aa10.74□□□□□ -0.69
HMGB4-203ENST00000519684 IPO9Q96P70 1041 aaKnown RBP10.74□□□□□ -0.69
HMGB4-203ENST00000519684 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
HMGB4-203ENST00000519684 BRPF1P55201 1214 aaPredicted RBP10.73□□□□□ -0.69
HMGB4-203ENST00000519684 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
HMGB4-203ENST00000519684 NWD1Q149M9 1564 aa10.73□□□□□ -0.69
HMGB4-203ENST00000519684 VAMP4O75379 141 aa10.73□□□□□ -0.69
HMGB4-203ENST00000519684 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
HMGB4-203ENST00000519684 TWISTNBQ3B726 338 aaPredicted RBP10.73□□□□□ -0.69
HMGB4-203ENST00000519684 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
HMGB4-203ENST00000519684 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
HMGB4-203ENST00000519684 DCTN1Q14203 1278 aa10.72□□□□□ -0.69
HMGB4-203ENST00000519684 CHMP4BQ9H444 224 aaKnown RBP10.72□□□□□ -0.69
HMGB4-203ENST00000519684 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
HMGB4-203ENST00000519684 TMEM57Q8N5G2 664 aa10.72□□□□□ -0.69
HMGB4-203ENST00000519684 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
HMGB4-203ENST00000519684 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
HMGB4-203ENST00000519684 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
HMGB4-203ENST00000519684 LTN1O94822 1766 aa10.71□□□□□ -0.69
HMGB4-203ENST00000519684 PSME1Q06323 249 aa10.71□□□□□ -0.69
HMGB4-203ENST00000519684 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
HMGB4-203ENST00000519684 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
HMGB4-203ENST00000519684 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.69
HMGB4-203ENST00000519684 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
HMGB4-203ENST00000519684 RTL1A6NKG5 1358 aa10.71□□□□□ -0.7
HMGB4-203ENST00000519684 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
HMGB4-203ENST00000519684 HOXC9P31274 260 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 TSPYL6Q8N831 410 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
HMGB4-203ENST00000519684 KDRP35968 1356 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 MCM10Q7L590 875 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 EYA1Q99502 592 aa10.7□□□□□ -0.7
HMGB4-203ENST00000519684 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
HMGB4-203ENST00000519684 C8orf34Q49A92 452 aa10.69□□□□□ -0.7
HMGB4-203ENST00000519684 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
HMGB4-203ENST00000519684 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
HMGB4-203ENST00000519684 CHL1O00533 1208 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 HDAC1Q13547 482 aaPredicted RBP10.68□□□□□ -0.7
HMGB4-203ENST00000519684 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms