RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 SLIT3O75094 1523 aa13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 ABCC6O95255 1503 aa13.08□□□□□ -0.32
PDGFRB-205ENST00000519575 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 GNAI1P63096 354 aa13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 KDRP35968 1356 aa13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
PDGFRB-205ENST00000519575 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
PDGFRB-205ENST00000519575 NFAT5O94916 1531 aa13.06□□□□□ -0.32
PDGFRB-205ENST00000519575 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
PDGFRB-205ENST00000519575 STRCQ7RTU9 1775 aa13.06□□□□□ -0.32
PDGFRB-205ENST00000519575 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
PDGFRB-205ENST00000519575 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
PDGFRB-205ENST00000519575 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
PDGFRB-205ENST00000519575 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
PDGFRB-205ENST00000519575 GAS2L2Q8NHY3 880 aa13.04□□□□□ -0.32
PDGFRB-205ENST00000519575 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
PDGFRB-205ENST00000519575 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
PDGFRB-205ENST00000519575 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
PDGFRB-205ENST00000519575 HMOX1P09601 288 aa13.03□□□□□ -0.32
PDGFRB-205ENST00000519575 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
PDGFRB-205ENST00000519575 PLEKHG2Q9H7P9 1386 aa13.03□□□□□ -0.32
PDGFRB-205ENST00000519575 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
PDGFRB-205ENST00000519575 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 HOXC9P31274 260 aa13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 RARSP54136 660 aaKnown RBP13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 USP19O94966 1318 aa13.02□□□□□ -0.33
PDGFRB-205ENST00000519575 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
PDGFRB-205ENST00000519575 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
PDGFRB-205ENST00000519575 IP6K1Q92551 441 aa13.01□□□□□ -0.33
PDGFRB-205ENST00000519575 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
PDGFRB-205ENST00000519575 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
PDGFRB-205ENST00000519575 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
PDGFRB-205ENST00000519575 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
PDGFRB-205ENST00000519575 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
PDGFRB-205ENST00000519575 CFAP44Q96MT7 982 aa13□□□□□ -0.33
PDGFRB-205ENST00000519575 FBLN1P23142 703 aa12.99□□□□□ -0.33
PDGFRB-205ENST00000519575 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
PDGFRB-205ENST00000519575 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
PDGFRB-205ENST00000519575 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
PDGFRB-205ENST00000519575 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
PDGFRB-205ENST00000519575 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 SOS1Q07889 1333 aaPredicted RBP12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 SOX12O15370 315 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 LRRC37A3O60309 1634 aa12.98□□□□□ -0.33
PDGFRB-205ENST00000519575 KIAA0232Q92628 1395 aa12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 FOXO3O43524 673 aa12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 ORAI2Q96SN7 254 aa12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
PDGFRB-205ENST00000519575 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
PDGFRB-205ENST00000519575 PLIN1O60240 522 aa12.96□□□□□ -0.33
PDGFRB-205ENST00000519575 ZNF853P0CG23 659 aa12.96□□□□□ -0.33
PDGFRB-205ENST00000519575 HSPA2P54652 639 aa12.96□□□□□ -0.33
PDGFRB-205ENST00000519575 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
PDGFRB-205ENST00000519575 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
PDGFRB-205ENST00000519575 BCAR3O75815 825 aa12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 GCP02774 474 aa12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 TSR2Q969E8 191 aaKnown RBP12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 EYA1Q99502 592 aa12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
PDGFRB-205ENST00000519575 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
PDGFRB-205ENST00000519575 PXDNQ92626 1479 aa12.94□□□□□ -0.34
PDGFRB-205ENST00000519575 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
PDGFRB-205ENST00000519575 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
PDGFRB-205ENST00000519575 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
PDGFRB-205ENST00000519575 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 DZIP1LQ8IYY4 767 aaKnown RBP12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
PDGFRB-205ENST00000519575 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms