RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SOCS7O14512 581 aa16.31■□□□□ 0.2
SPIDR-209ENST00000519141 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
SPIDR-209ENST00000519141 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 FCHSD2O94868 740 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 AMPHP49418 695 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 KCNH5Q8NCM2 988 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 PXDNQ92626 1479 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
SPIDR-209ENST00000519141 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
SPIDR-209ENST00000519141 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
SPIDR-209ENST00000519141 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
SPIDR-209ENST00000519141 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
SPIDR-209ENST00000519141 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
SPIDR-209ENST00000519141 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 USP19O94966 1318 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 NEFMP07197 916 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
SPIDR-209ENST00000519141 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
SPIDR-209ENST00000519141 NEFLP07196 543 aa16.27■□□□□ 0.2
SPIDR-209ENST00000519141 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
SPIDR-209ENST00000519141 HMOX1P09601 288 aa16.27■□□□□ 0.19
SPIDR-209ENST00000519141 PRKAR2BP31323 418 aa16.27■□□□□ 0.19
SPIDR-209ENST00000519141 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.19
SPIDR-209ENST00000519141 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.19
SPIDR-209ENST00000519141 HOXC9P31274 260 aa16.26■□□□□ 0.19
SPIDR-209ENST00000519141 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
SPIDR-209ENST00000519141 CCDC27Q2M243 656 aa16.26■□□□□ 0.19
SPIDR-209ENST00000519141 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
SPIDR-209ENST00000519141 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
SPIDR-209ENST00000519141 LRP6O75581 1613 aa16.25■□□□□ 0.19
SPIDR-209ENST00000519141 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
SPIDR-209ENST00000519141 GCP02774 474 aa16.24■□□□□ 0.19
SPIDR-209ENST00000519141 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
SPIDR-209ENST00000519141 CRYBG1Q9Y4K1 1723 aa16.23■□□□□ 0.19
SPIDR-209ENST00000519141 SPATA31A3Q5VYP0 1347 aa16.23■□□□□ 0.19
SPIDR-209ENST00000519141 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
SPIDR-209ENST00000519141 E9PSI1 815 aa16.22■□□□□ 0.19
SPIDR-209ENST00000519141 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
SPIDR-209ENST00000519141 SLFN5Q08AF3 891 aa16.22■□□□□ 0.19
SPIDR-209ENST00000519141 IP6K1Q92551 441 aa16.22■□□□□ 0.19
SPIDR-209ENST00000519141 ZBTB7CA1YPR0 619 aa16.21■□□□□ 0.19
SPIDR-209ENST00000519141 SULT6B1Q6IMI4 303 aa16.21■□□□□ 0.19
SPIDR-209ENST00000519141 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
SPIDR-209ENST00000519141 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.18
SPIDR-209ENST00000519141 ARHGEF25Q86VW2 580 aa16.21■□□□□ 0.18
SPIDR-209ENST00000519141 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.18
SPIDR-209ENST00000519141 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
SPIDR-209ENST00000519141 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
SPIDR-209ENST00000519141 NUTM2BA6NNL0 878 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-209ENST00000519141 NUTM2EB1AL46 878 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-209ENST00000519141 RIPK4P57078 832 aa16.2■□□□□ 0.18
SPIDR-209ENST00000519141 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
SPIDR-209ENST00000519141 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-209ENST00000519141 KDRP35968 1356 aa16.19■□□□□ 0.18
SPIDR-209ENST00000519141 TRMT2AQ8IZ69 625 aaKnown RBP16.19■□□□□ 0.18
SPIDR-209ENST00000519141 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
SPIDR-209ENST00000519141 FKBP8Q14318 412 aa16.18■□□□□ 0.18
SPIDR-209ENST00000519141 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
SPIDR-209ENST00000519141 EYA1Q99502 592 aa16.18■□□□□ 0.18
SPIDR-209ENST00000519141 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
SPIDR-209ENST00000519141 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-209ENST00000519141 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-209ENST00000519141 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
SPIDR-209ENST00000519141 ABCC6O95255 1503 aa16.17■□□□□ 0.18
SPIDR-209ENST00000519141 ABCA3Q99758 1704 aa16.16■□□□□ 0.18
SPIDR-209ENST00000519141 RGPD5Q99666 1765 aa16.16■□□□□ 0.18
SPIDR-209ENST00000519141 RGPD2P0DJD1 1756 aa16.16■□□□□ 0.18
SPIDR-209ENST00000519141 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
SPIDR-209ENST00000519141 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
SPIDR-209ENST00000519141 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
SPIDR-209ENST00000519141 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.18
SPIDR-209ENST00000519141 IL16Q14005 1332 aa16.14■□□□□ 0.17
SPIDR-209ENST00000519141 COL18A1P39060 1754 aa16.14■□□□□ 0.17
SPIDR-209ENST00000519141 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-209ENST00000519141 CABLES1Q8TDN4 633 aa16.14■□□□□ 0.17
SPIDR-209ENST00000519141 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
SPIDR-209ENST00000519141 CPDO75976 1380 aa16.13■□□□□ 0.17
SPIDR-209ENST00000519141 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
SPIDR-209ENST00000519141 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
SPIDR-209ENST00000519141 IRX6P78412 446 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-209ENST00000519141 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
SPIDR-209ENST00000519141 AFF2P51816 1311 aa16.11■□□□□ 0.17
SPIDR-209ENST00000519141 ADAMTS2O95450 1211 aa16.11■□□□□ 0.17
SPIDR-209ENST00000519141 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
SPIDR-209ENST00000519141 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
SPIDR-209ENST00000519141 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-209ENST00000519141 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
SPIDR-209ENST00000519141 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
SPIDR-209ENST00000519141 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-209ENST00000519141 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
SPIDR-209ENST00000519141 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms