RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 AMPHP49418 695 aa30.56■■■□□ 2.48
SLIT3-204ENST00000518140 AEBP1Q8IUX7 1158 aa30.56■■■□□ 2.48
SLIT3-204ENST00000518140 KRT28Q7Z3Y7 464 aa30.56■■■□□ 2.48
SLIT3-204ENST00000518140 SBNO1A3KN83 1393 aa30.55■■■□□ 2.48
SLIT3-204ENST00000518140 DDX17Q92841 729 aaKnown RBP30.55■■■□□ 2.48
SLIT3-204ENST00000518140 PLIN1O60240 522 aa30.54■■■□□ 2.48
SLIT3-204ENST00000518140 ERICH6BQ5W0A0 696 aa30.54■■■□□ 2.48
SLIT3-204ENST00000518140 CADPS2Q86UW7 1296 aa30.53■■■□□ 2.48
SLIT3-204ENST00000518140 DCCP43146 1447 aa30.53■■■□□ 2.48
SLIT3-204ENST00000518140 FLT4P35916 1363 aa30.53■■■□□ 2.48
SLIT3-204ENST00000518140 SULT6B1Q6IMI4 303 aa30.53■■■□□ 2.48
SLIT3-204ENST00000518140 PLEKHG5O94827 1062 aa30.52■■■□□ 2.48
SLIT3-204ENST00000518140 USP54Q70EL1 1684 aa30.52■■■□□ 2.48
SLIT3-204ENST00000518140 MSH6P52701 1360 aa30.51■■■□□ 2.47
SLIT3-204ENST00000518140 LMOD2Q6P5Q4 547 aa30.5■■■□□ 2.47
SLIT3-204ENST00000518140 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
SLIT3-204ENST00000518140 HOXC9P31274 260 aa30.5■■■□□ 2.47
SLIT3-204ENST00000518140 NFE2L2Q16236 605 aa30.49■■■□□ 2.47
SLIT3-204ENST00000518140 NEFMP07197 916 aa30.48■■■□□ 2.47
SLIT3-204ENST00000518140 PPP4R2Q9NY27 417 aa30.47■■■□□ 2.47
SLIT3-204ENST00000518140 KIF1AQ12756 1690 aa30.44■■■□□ 2.46
SLIT3-204ENST00000518140 EYA1Q99502 592 aa30.44■■■□□ 2.46
SLIT3-204ENST00000518140 TRPM3Q9HCF6 1732 aaPredicted RBP30.43■■■□□ 2.46
SLIT3-204ENST00000518140 NFAT5O94916 1531 aa30.43■■■□□ 2.46
SLIT3-204ENST00000518140 TSR2Q969E8 191 aaKnown RBP30.43■■■□□ 2.46
SLIT3-204ENST00000518140 RGPD1P0DJD0 1748 aa30.42■■■□□ 2.46
SLIT3-204ENST00000518140 GCP02774 474 aa30.42■■■□□ 2.46
SLIT3-204ENST00000518140 BCAR3O75815 825 aa30.42■■■□□ 2.46
SLIT3-204ENST00000518140 LTV1Q96GA3 475 aaPredicted RBP30.42■■■□□ 2.46
SLIT3-204ENST00000518140 THUMPD2Q9BTF0 503 aaKnown RBP30.42■■■□□ 2.46
SLIT3-204ENST00000518140 ZBTB7CA1YPR0 619 aa30.41■■■□□ 2.46
SLIT3-204ENST00000518140 KCNH5Q8NCM2 988 aa30.41■■■□□ 2.46
SLIT3-204ENST00000518140 MYH16Q9H6N6 1097 aa30.41■■■□□ 2.46
SLIT3-204ENST00000518140 KIF24Q5T7B8 1368 aa30.4■■■□□ 2.46
SLIT3-204ENST00000518140 B4GALNT3Q6L9W6 998 aa30.4■■■□□ 2.46
SLIT3-204ENST00000518140 C20orf194Q5TEA3 1177 aa30.39■■■□□ 2.46
SLIT3-204ENST00000518140 EXOC6Q8TAG9 804 aa30.39■■■□□ 2.46
SLIT3-204ENST00000518140 ARHGEF10O15013 1369 aa30.39■■■□□ 2.45
SLIT3-204ENST00000518140 IP6K1Q92551 441 aa30.38■■■□□ 2.45
SLIT3-204ENST00000518140 FANCIQ9NVI1 1328 aa30.38■■■□□ 2.45
SLIT3-204ENST00000518140 IL16Q14005 1332 aa30.37■■■□□ 2.45
SLIT3-204ENST00000518140 IGSF1Q8N6C5 1336 aa30.37■■■□□ 2.45
SLIT3-204ENST00000518140 BRINP3Q76B58 766 aa30.37■■■□□ 2.45
SLIT3-204ENST00000518140 USP19O94966 1318 aa30.36■■■□□ 2.45
SLIT3-204ENST00000518140 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
SLIT3-204ENST00000518140 SLAIN2Q9P270 581 aa30.35■■■□□ 2.45
SLIT3-204ENST00000518140 LTN1O94822 1766 aa30.34■■■□□ 2.45
SLIT3-204ENST00000518140 NPHP3Q7Z494 1330 aa30.34■■■□□ 2.45
SLIT3-204ENST00000518140 ARHGEF25Q86VW2 580 aa30.34■■■□□ 2.45
SLIT3-204ENST00000518140 DCTN1Q14203 1278 aa30.34■■■□□ 2.45
SLIT3-204ENST00000518140 SLIT3O75094 1523 aa30.34■■■□□ 2.45
SLIT3-204ENST00000518140 RTL1A6NKG5 1358 aa30.33■■■□□ 2.45
SLIT3-204ENST00000518140 KDRP35968 1356 aa30.33■■■□□ 2.45
SLIT3-204ENST00000518140 EXOSC9Q06265 439 aaKnown RBP30.32■■■□□ 2.44
SLIT3-204ENST00000518140 RARSP54136 660 aaKnown RBP30.31■■■□□ 2.44
SLIT3-204ENST00000518140 LAS1LQ9Y4W2 734 aaKnown RBP30.31■■■□□ 2.44
SLIT3-204ENST00000518140 CRBNQ96SW2 442 aa30.31■■■□□ 2.44
SLIT3-204ENST00000518140 ALS2Q96Q42 1657 aa30.3■■■□□ 2.44
SLIT3-204ENST00000518140 USHBP1Q8N6Y0 703 aa30.3■■■□□ 2.44
SLIT3-204ENST00000518140 DLG5Q8TDM6 1919 aa30.29■■■□□ 2.44
SLIT3-204ENST00000518140 PXDNQ92626 1479 aa30.29■■■□□ 2.44
SLIT3-204ENST00000518140 MTHFSDQ2M296 383 aaKnown RBP30.28■■■□□ 2.44
SLIT3-204ENST00000518140 CABLES1Q8TDN4 633 aa30.28■■■□□ 2.44
SLIT3-204ENST00000518140 ZC3H6P61129 1189 aaKnown RBP30.27■■■□□ 2.44
SLIT3-204ENST00000518140 MED1Q15648 1581 aaPredicted RBP30.27■■■□□ 2.44
SLIT3-204ENST00000518140 NBPF6Q5VWK0 638 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 NBPF4Q96M43 638 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 BCL2L13Q9BXK5 485 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 AXIN2Q9Y2T1 843 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 LMOD3Q0VAK6 560 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 SPATA31A3Q5VYP0 1347 aa30.26■■■□□ 2.43
SLIT3-204ENST00000518140 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.25■■■□□ 2.43
SLIT3-204ENST00000518140 LRRC59Q96AG4 307 aaKnown RBP30.24■■■□□ 2.43
SLIT3-204ENST00000518140 ZNF853P0CG23 659 aa30.24■■■□□ 2.43
SLIT3-204ENST00000518140 MCM10Q7L590 875 aa30.24■■■□□ 2.43
SLIT3-204ENST00000518140 TNS3Q68CZ2 1445 aa30.23■■■□□ 2.43
SLIT3-204ENST00000518140 CALD1Q05682 793 aaKnown RBP30.21■■■□□ 2.43
SLIT3-204ENST00000518140 CCDC136Q96JN2 1154 aa30.21■■■□□ 2.43
SLIT3-204ENST00000518140 IFT57Q9NWB7 429 aa30.21■■■□□ 2.43
SLIT3-204ENST00000518140 MBIPQ9NS73 344 aa30.21■■■□□ 2.43
SLIT3-204ENST00000518140 PHRF1Q9P1Y6 1649 aaKnown RBP30.2■■■□□ 2.43
SLIT3-204ENST00000518140 GNAI1P63096 354 aa30.19■■■□□ 2.42
SLIT3-204ENST00000518140 FRAT1Q92837 279 aaPredicted RBP30.19■■■□□ 2.42
SLIT3-204ENST00000518140 ANKRD24Q8TF21 1146 aa30.18■■■□□ 2.42
SLIT3-204ENST00000518140 CFAP44Q96MT7 982 aa30.18■■■□□ 2.42
SLIT3-204ENST00000518140 CT47B1P0C2W7 299 aaPredicted RBP30.17■■■□□ 2.42
SLIT3-204ENST00000518140 SOS2Q07890 1332 aaPredicted RBP30.17■■■□□ 2.42
SLIT3-204ENST00000518140 TNNQ9UQP3 1299 aa30.15■■■□□ 2.42
SLIT3-204ENST00000518140 TSPYL6Q8N831 410 aa30.15■■■□□ 2.42
SLIT3-204ENST00000518140 GAS2L2Q8NHY3 880 aa30.15■■■□□ 2.42
SLIT3-204ENST00000518140 SSH1Q8WYL5 1049 aa30.15■■■□□ 2.42
SLIT3-204ENST00000518140 RGPD2P0DJD1 1756 aa30.14■■■□□ 2.41
SLIT3-204ENST00000518140 CANXP27824 592 aaKnown RBP30.13■■■□□ 2.41
SLIT3-204ENST00000518140 PANK1Q8TE04 598 aa30.13■■■□□ 2.41
SLIT3-204ENST00000518140 ANP32EQ9BTT0 268 aa30.13■■■□□ 2.41
SLIT3-204ENST00000518140 RBM19Q9Y4C8 960 aaKnown RBP30.12■■■□□ 2.41
SLIT3-204ENST00000518140 ELL2O00472 640 aaPredicted RBP30.11■■■□□ 2.41
SLIT3-204ENST00000518140 CHRNA2Q15822 529 aa30.11■■■□□ 2.41
SLIT3-204ENST00000518140 SMC4Q9NTJ3 1288 aa30.1■■■□□ 2.41
SLIT3-204ENST00000518140 CRB1P82279 1406 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms