RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
CPEB4-203ENST00000517880 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
CPEB4-203ENST00000517880 POLA2Q14181 598 aa13.92□□□□□ -0.18
CPEB4-203ENST00000517880 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
CPEB4-203ENST00000517880 ADGRL3Q9HAR2 1447 aa13.92□□□□□ -0.18
CPEB4-203ENST00000517880 RGPD8O14715 1765 aaPredicted RBP13.92□□□□□ -0.18
CPEB4-203ENST00000517880 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
CPEB4-203ENST00000517880 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
CPEB4-203ENST00000517880 FBLN1P23142 703 aa13.91□□□□□ -0.18
CPEB4-203ENST00000517880 AAMPQ13685 434 aa13.91□□□□□ -0.18
CPEB4-203ENST00000517880 NFE2L2Q16236 605 aa13.91□□□□□ -0.18
CPEB4-203ENST00000517880 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
CPEB4-203ENST00000517880 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
CPEB4-203ENST00000517880 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
CPEB4-203ENST00000517880 NWD1Q149M9 1564 aa13.9□□□□□ -0.18
CPEB4-203ENST00000517880 MS4A1P11836 297 aa13.9□□□□□ -0.19
CPEB4-203ENST00000517880 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.19
CPEB4-203ENST00000517880 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
CPEB4-203ENST00000517880 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
CPEB4-203ENST00000517880 BCAR3O75815 825 aa13.88□□□□□ -0.19
CPEB4-203ENST00000517880 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
CPEB4-203ENST00000517880 HMOX1P09601 288 aa13.87□□□□□ -0.19
CPEB4-203ENST00000517880 NLRP6P59044 892 aa13.87□□□□□ -0.19
CPEB4-203ENST00000517880 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
CPEB4-203ENST00000517880 FLT4P35916 1363 aa13.86□□□□□ -0.19
CPEB4-203ENST00000517880 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
CPEB4-203ENST00000517880 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
CPEB4-203ENST00000517880 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
CPEB4-203ENST00000517880 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
CPEB4-203ENST00000517880 GNAI1P63096 354 aa13.85□□□□□ -0.19
CPEB4-203ENST00000517880 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
CPEB4-203ENST00000517880 PHACTR3Q96KR7 559 aa13.85□□□□□ -0.19
CPEB4-203ENST00000517880 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
CPEB4-203ENST00000517880 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
CPEB4-203ENST00000517880 AMPHP49418 695 aa13.84□□□□□ -0.19
CPEB4-203ENST00000517880 C14orf37Q86TY3 774 aa13.84□□□□□ -0.19
CPEB4-203ENST00000517880 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
CPEB4-203ENST00000517880 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
CPEB4-203ENST00000517880 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
CPEB4-203ENST00000517880 PSME1Q06323 249 aa13.83□□□□□ -0.2
CPEB4-203ENST00000517880 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
CPEB4-203ENST00000517880 CENPQQ7L2Z9 268 aaPredicted RBP13.83□□□□□ -0.2
CPEB4-203ENST00000517880 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
CPEB4-203ENST00000517880 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
CPEB4-203ENST00000517880 PEAK1Q9H792 1746 aa13.83□□□□□ -0.2
CPEB4-203ENST00000517880 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
CPEB4-203ENST00000517880 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
CPEB4-203ENST00000517880 ESCO1Q5FWF5 840 aa13.82□□□□□ -0.2
CPEB4-203ENST00000517880 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
CPEB4-203ENST00000517880 KCNH5Q8NCM2 988 aa13.82□□□□□ -0.2
CPEB4-203ENST00000517880 RBM19Q9Y4C8 960 aaKnown RBP13.82□□□□□ -0.2
CPEB4-203ENST00000517880 RGPD1P0DJD0 1748 aa13.82□□□□□ -0.2
CPEB4-203ENST00000517880 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
CPEB4-203ENST00000517880 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
CPEB4-203ENST00000517880 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
CPEB4-203ENST00000517880 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
CPEB4-203ENST00000517880 IPO8O15397 1037 aaKnown RBP13.81□□□□□ -0.2
CPEB4-203ENST00000517880 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
CPEB4-203ENST00000517880 EVX2Q03828 476 aa13.81□□□□□ -0.2
CPEB4-203ENST00000517880 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
CPEB4-203ENST00000517880 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
CPEB4-203ENST00000517880 CFAP44Q96MT7 982 aa13.81□□□□□ -0.2
CPEB4-203ENST00000517880 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
CPEB4-203ENST00000517880 KDRP35968 1356 aa13.79□□□□□ -0.2
CPEB4-203ENST00000517880 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
CPEB4-203ENST00000517880 DCCP43146 1447 aa13.79□□□□□ -0.2
CPEB4-203ENST00000517880 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 IGSF1Q8N6C5 1336 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 HTATSF1O43719 755 aaKnown RBP13.78□□□□□ -0.2
CPEB4-203ENST00000517880 HOXC9P31274 260 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 DLG5Q8TDM6 1919 aa13.78□□□□□ -0.2
CPEB4-203ENST00000517880 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
CPEB4-203ENST00000517880 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.21
CPEB4-203ENST00000517880 IP6K1Q92551 441 aa13.77□□□□□ -0.21
CPEB4-203ENST00000517880 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
CPEB4-203ENST00000517880 SOX12O15370 315 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 ATF3P18847 181 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 SSH1Q8WYL5 1049 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 ARHGAP45Q92619 1136 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
CPEB4-203ENST00000517880 EYA1Q99502 592 aa13.76□□□□□ -0.21
CPEB4-203ENST00000517880 MST1RQ04912 1400 aa13.75□□□□□ -0.21
CPEB4-203ENST00000517880 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
CPEB4-203ENST00000517880 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
CPEB4-203ENST00000517880 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
CPEB4-203ENST00000517880 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
CPEB4-203ENST00000517880 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
CPEB4-203ENST00000517880 VAMP4O75379 141 aa13.74□□□□□ -0.21
CPEB4-203ENST00000517880 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
CPEB4-203ENST00000517880 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
CPEB4-203ENST00000517880 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
CPEB4-203ENST00000517880 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
CPEB4-203ENST00000517880 PHRF1Q9P1Y6 1649 aaKnown RBP13.74□□□□□ -0.21
CPEB4-203ENST00000517880 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
CPEB4-203ENST00000517880 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms