RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
PCM1-203ENST00000517545 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
PCM1-203ENST00000517545 ATAD2Q6PL18 1390 aa15.31■□□□□ 0.04
PCM1-203ENST00000517545 OFD1O75665 1012 aa15.31■□□□□ 0.04
PCM1-203ENST00000517545 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
PCM1-203ENST00000517545 ZSCAN23Q3MJ62 389 aa15.31■□□□□ 0.04
PCM1-203ENST00000517545 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
PCM1-203ENST00000517545 IBTKQ9P2D0 1353 aaPredicted RBP15.31■□□□□ 0.04
PCM1-203ENST00000517545 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
PCM1-203ENST00000517545 RBM10P98175 930 aaKnown RBP15.3■□□□□ 0.04
PCM1-203ENST00000517545 RBSNQ9H1K0 784 aa15.3■□□□□ 0.04
PCM1-203ENST00000517545 LMBRD1Q9NUN5 540 aa15.3■□□□□ 0.04
PCM1-203ENST00000517545 ARHGEF28Q8N1W1 1705 aaKnown RBP15.3■□□□□ 0.04
PCM1-203ENST00000517545 BRPF1P55201 1214 aaPredicted RBP15.3■□□□□ 0.04
PCM1-203ENST00000517545 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
PCM1-203ENST00000517545 CHAMP1Q96JM3 812 aa15.3■□□□□ 0.04
PCM1-203ENST00000517545 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
PCM1-203ENST00000517545 MINK1Q8N4C8 1332 aaPredicted RBP15.3■□□□□ 0.04
PCM1-203ENST00000517545 ZNF445P59923 1031 aa15.29■□□□□ 0.04
PCM1-203ENST00000517545 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
PCM1-203ENST00000517545 PDCL3Q9H2J4 239 aa15.29■□□□□ 0.04
PCM1-203ENST00000517545 HMOX1P09601 288 aa15.29■□□□□ 0.04
PCM1-203ENST00000517545 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
PCM1-203ENST00000517545 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
PCM1-203ENST00000517545 KIDINS220Q9ULH0 1771 aa15.28■□□□□ 0.04
PCM1-203ENST00000517545 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
PCM1-203ENST00000517545 FCHSD2O94868 740 aa15.28■□□□□ 0.04
PCM1-203ENST00000517545 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
PCM1-203ENST00000517545 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
PCM1-203ENST00000517545 RABEP1Q15276 862 aa15.28■□□□□ 0.04
PCM1-203ENST00000517545 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
PCM1-203ENST00000517545 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
PCM1-203ENST00000517545 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.04
PCM1-203ENST00000517545 CAMSAP1Q5T5Y3 1602 aa15.27■□□□□ 0.04
PCM1-203ENST00000517545 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
PCM1-203ENST00000517545 ABCC4O15439 1325 aa15.27■□□□□ 0.04
PCM1-203ENST00000517545 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.04
PCM1-203ENST00000517545 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
PCM1-203ENST00000517545 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
PCM1-203ENST00000517545 ARHGAP45Q92619 1136 aa15.27■□□□□ 0.03
PCM1-203ENST00000517545 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.03
PCM1-203ENST00000517545 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.03
PCM1-203ENST00000517545 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
PCM1-203ENST00000517545 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 PRPF40AO75400 957 aaKnown RBP15.26■□□□□ 0.03
PCM1-203ENST00000517545 NUCB2P80303 420 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 XPCQ01831 940 aaPredicted RBP15.26■□□□□ 0.03
PCM1-203ENST00000517545 GPT2Q8TD30 523 aa15.26■□□□□ 0.03
PCM1-203ENST00000517545 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
PCM1-203ENST00000517545 ARHGAP31Q2M1Z3 1444 aa15.25■□□□□ 0.03
PCM1-203ENST00000517545 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
PCM1-203ENST00000517545 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
PCM1-203ENST00000517545 FAM135BQ49AJ0 1406 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 C8orf58Q8NAV2 365 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCM1-203ENST00000517545 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
PCM1-203ENST00000517545 PDLIM2Q96JY6 352 aa15.24■□□□□ 0.03
PCM1-203ENST00000517545 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
PCM1-203ENST00000517545 APBB1O00213 710 aa15.23■□□□□ 0.03
PCM1-203ENST00000517545 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
PCM1-203ENST00000517545 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
PCM1-203ENST00000517545 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
PCM1-203ENST00000517545 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
PCM1-203ENST00000517545 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
PCM1-203ENST00000517545 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
PCM1-203ENST00000517545 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
PCM1-203ENST00000517545 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
PCM1-203ENST00000517545 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
PCM1-203ENST00000517545 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
PCM1-203ENST00000517545 GNAI1P63096 354 aa15.21■□□□□ 0.03
PCM1-203ENST00000517545 SDSP20132 328 aa15.21■□□□□ 0.03
PCM1-203ENST00000517545 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
PCM1-203ENST00000517545 FAM83GA6ND36 823 aa15.21■□□□□ 0.02
PCM1-203ENST00000517545 ZNF853P0CG23 659 aa15.21■□□□□ 0.02
PCM1-203ENST00000517545 HS1BP3Q53T59 392 aa15.21■□□□□ 0.02
PCM1-203ENST00000517545 HDGFL2Q7Z4V5 671 aaPredicted RBP15.21■□□□□ 0.02
PCM1-203ENST00000517545 SYCE3A1L190 88 aa15.2■□□□□ 0.02
PCM1-203ENST00000517545 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
PCM1-203ENST00000517545 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
PCM1-203ENST00000517545 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
PCM1-203ENST00000517545 IDI1Q13907 227 aa15.2■□□□□ 0.02
PCM1-203ENST00000517545 FRMPD1Q5SYB0 1578 aa15.2■□□□□ 0.02
PCM1-203ENST00000517545 DCTN1Q14203 1278 aa15.2■□□□□ 0.02
PCM1-203ENST00000517545 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
PCM1-203ENST00000517545 EMILIN1Q9Y6C2 1016 aa15.19■□□□□ 0.02
PCM1-203ENST00000517545 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
PCM1-203ENST00000517545 UQCRHP07919 91 aa15.19■□□□□ 0.02
PCM1-203ENST00000517545 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
PCM1-203ENST00000517545 CWC22Q9HCG8 908 aaKnown RBP15.19■□□□□ 0.02
PCM1-203ENST00000517545 TERF1P54274 439 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 ARID3AQ99856 593 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 ZKSCAN5Q9Y2L8 839 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 ABCC3O15438 1527 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms