RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 USP31Q70CQ4 1352 aa25.38■■□□□ 1.65
HOXA11-202ENST00000517402 AEBP1Q8IUX7 1158 aa25.37■■□□□ 1.65
HOXA11-202ENST00000517402 SETD1BQ9UPS6 1966 aaKnown RBP25.37■■□□□ 1.65
HOXA11-202ENST00000517402 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
HOXA11-202ENST00000517402 TTC21AQ8NDW8 1320 aa25.36■■□□□ 1.65
HOXA11-202ENST00000517402 LAS1LQ9Y4W2 734 aaKnown RBP25.36■■□□□ 1.65
HOXA11-202ENST00000517402 ANKARQ7Z5J8 1434 aa25.36■■□□□ 1.65
HOXA11-202ENST00000517402 SMC4Q9NTJ3 1288 aa25.36■■□□□ 1.65
HOXA11-202ENST00000517402 CT47B1P0C2W7 299 aaPredicted RBP25.34■■□□□ 1.65
HOXA11-202ENST00000517402 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
HOXA11-202ENST00000517402 MAP3K19Q56UN5 1328 aa25.33■■□□□ 1.65
HOXA11-202ENST00000517402 IGHDP01880 384 aa25.33■■□□□ 1.64
HOXA11-202ENST00000517402 SULT6B1Q6IMI4 303 aa25.32■■□□□ 1.64
HOXA11-202ENST00000517402 FAM83GA6ND36 823 aa25.31■■□□□ 1.64
HOXA11-202ENST00000517402 RGPD1P0DJD0 1748 aa25.31■■□□□ 1.64
HOXA11-202ENST00000517402 PDE4AP27815 886 aa25.31■■□□□ 1.64
HOXA11-202ENST00000517402 NUTM2GQ5VZR2 741 aa25.31■■□□□ 1.64
HOXA11-202ENST00000517402 MARF1Q9Y4F3 1742 aaKnown RBP25.3■■□□□ 1.64
HOXA11-202ENST00000517402 MS4A1P11836 297 aa25.3■■□□□ 1.64
HOXA11-202ENST00000517402 ZKSCAN2Q63HK3 967 aa25.3■■□□□ 1.64
HOXA11-202ENST00000517402 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
HOXA11-202ENST00000517402 NPHP4O75161 1426 aaPredicted RBP25.27■■□□□ 1.64
HOXA11-202ENST00000517402 TRIM27P14373 513 aa25.27■■□□□ 1.64
HOXA11-202ENST00000517402 FTSJ3Q8IY81 847 aaKnown RBP25.27■■□□□ 1.64
HOXA11-202ENST00000517402 NLRP6P59044 892 aa25.27■■□□□ 1.64
HOXA11-202ENST00000517402 BACH2Q9BYV9 841 aa25.27■■□□□ 1.64
HOXA11-202ENST00000517402 DZIP1LQ8IYY4 767 aaKnown RBP25.25■■□□□ 1.63
HOXA11-202ENST00000517402 PAK3O75914 559 aaPredicted RBP25.25■■□□□ 1.63
HOXA11-202ENST00000517402 RGS3P49796 1198 aa25.25■■□□□ 1.63
HOXA11-202ENST00000517402 MVPQ14764 893 aaKnown RBP25.25■■□□□ 1.63
HOXA11-202ENST00000517402 MBIPQ9NS73 344 aa25.25■■□□□ 1.63
HOXA11-202ENST00000517402 NOB1Q9ULX3 412 aaKnown RBP25.25■■□□□ 1.63
HOXA11-202ENST00000517402 FLT4P35916 1363 aa25.25■■□□□ 1.63
HOXA11-202ENST00000517402 SBNO1A3KN83 1393 aa25.24■■□□□ 1.63
HOXA11-202ENST00000517402 PCDHB15Q9Y5E8 787 aa25.24■■□□□ 1.63
HOXA11-202ENST00000517402 IFT57Q9NWB7 429 aa25.24■■□□□ 1.63
HOXA11-202ENST00000517402 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
HOXA11-202ENST00000517402 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
HOXA11-202ENST00000517402 TSPYL6Q8N831 410 aa25.23■■□□□ 1.63
HOXA11-202ENST00000517402 ZNF853P0CG23 659 aa25.22■■□□□ 1.63
HOXA11-202ENST00000517402 GNAI1P63096 354 aa25.22■■□□□ 1.63
HOXA11-202ENST00000517402 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
HOXA11-202ENST00000517402 ELL2O00472 640 aaPredicted RBP25.22■■□□□ 1.63
HOXA11-202ENST00000517402 ATF7IPQ6VMQ6 1270 aa25.22■■□□□ 1.63
HOXA11-202ENST00000517402 PHF8Q9UPP1 1060 aa25.22■■□□□ 1.63
HOXA11-202ENST00000517402 AMPHP49418 695 aa25.21■■□□□ 1.63
HOXA11-202ENST00000517402 ABTB2Q8N961 1025 aa25.21■■□□□ 1.63
HOXA11-202ENST00000517402 C14orf37Q86TY3 774 aa25.2■■□□□ 1.62
HOXA11-202ENST00000517402 USP54Q70EL1 1684 aa25.2■■□□□ 1.62
HOXA11-202ENST00000517402 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
HOXA11-202ENST00000517402 NPM2Q86SE8 214 aaKnown RBP25.19■■□□□ 1.62
HOXA11-202ENST00000517402 CFAP44Q96MT7 982 aa25.19■■□□□ 1.62
HOXA11-202ENST00000517402 ARHGEF10O15013 1369 aa25.19■■□□□ 1.62
HOXA11-202ENST00000517402 ITPRIPQ8IWB1 547 aa25.18■■□□□ 1.62
HOXA11-202ENST00000517402 VAMP4O75379 141 aa25.18■■□□□ 1.62
HOXA11-202ENST00000517402 ANP32AP39687 249 aaKnown RBP25.18■■□□□ 1.62
HOXA11-202ENST00000517402 ALDH1L2Q3SY69 923 aa25.18■■□□□ 1.62
HOXA11-202ENST00000517402 MCM10Q7L590 875 aa25.17■■□□□ 1.62
HOXA11-202ENST00000517402 ESCO1Q5FWF5 840 aa25.16■■□□□ 1.62
HOXA11-202ENST00000517402 TMEM57Q8N5G2 664 aa25.16■■□□□ 1.62
HOXA11-202ENST00000517402 AAMPQ13685 434 aa25.15■■□□□ 1.62
HOXA11-202ENST00000517402 C8orf58Q8NAV2 365 aa25.15■■□□□ 1.62
HOXA11-202ENST00000517402 EYA1Q99502 592 aa25.15■■□□□ 1.62
HOXA11-202ENST00000517402 FOXO3O43524 673 aa25.14■■□□□ 1.62
HOXA11-202ENST00000517402 ANP32EQ9BTT0 268 aa25.14■■□□□ 1.62
HOXA11-202ENST00000517402 HOXC9P31274 260 aa25.13■■□□□ 1.61
HOXA11-202ENST00000517402 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
HOXA11-202ENST00000517402 IGSF1Q8N6C5 1336 aa25.13■■□□□ 1.61
HOXA11-202ENST00000517402 KDRP35968 1356 aa25.13■■□□□ 1.61
HOXA11-202ENST00000517402 LTN1O94822 1766 aa25.13■■□□□ 1.61
HOXA11-202ENST00000517402 NWD1Q149M9 1564 aa25.13■■□□□ 1.61
HOXA11-202ENST00000517402 ZNF428Q96B54 188 aa25.12■■□□□ 1.61
HOXA11-202ENST00000517402 IPO8O15397 1037 aaKnown RBP25.11■■□□□ 1.61
HOXA11-202ENST00000517402 MTHFSDQ2M296 383 aaKnown RBP25.11■■□□□ 1.61
HOXA11-202ENST00000517402 MRPL50Q8N5N7 158 aaKnown RBP25.11■■□□□ 1.61
HOXA11-202ENST00000517402 DDX19BQ9UMR2 479 aa25.11■■□□□ 1.61
HOXA11-202ENST00000517402 C8orf34Q49A92 452 aa25.1■■□□□ 1.61
HOXA11-202ENST00000517402 KRT24Q2M2I5 525 aa25.1■■□□□ 1.61
HOXA11-202ENST00000517402 ORAI2Q96SN7 254 aa25.1■■□□□ 1.61
HOXA11-202ENST00000517402 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
HOXA11-202ENST00000517402 XPCQ01831 940 aaPredicted RBP25.09■■□□□ 1.61
HOXA11-202ENST00000517402 PSME1Q06323 249 aa25.09■■□□□ 1.61
HOXA11-202ENST00000517402 BRPF1P55201 1214 aaPredicted RBP25.08■■□□□ 1.61
HOXA11-202ENST00000517402 IPO9Q96P70 1041 aaKnown RBP25.08■■□□□ 1.61
HOXA11-202ENST00000517402 FAM161AQ3B820 660 aa25.07■■□□□ 1.6
HOXA11-202ENST00000517402 ERICH6Q7L0X2 663 aa25.07■■□□□ 1.6
HOXA11-202ENST00000517402 NFAT5O94916 1531 aa25.07■■□□□ 1.6
HOXA11-202ENST00000517402 KDM4FA0A1W2PPD8 638 aa25.06■■□□□ 1.6
HOXA11-202ENST00000517402 RWDD1Q9H446 243 aaPredicted RBP25.06■■□□□ 1.6
HOXA11-202ENST00000517402 KIF24Q5T7B8 1368 aa25.06■■□□□ 1.6
HOXA11-202ENST00000517402 CRB1P82279 1406 aa25.05■■□□□ 1.6
HOXA11-202ENST00000517402 CHL1O00533 1208 aa25.04■■□□□ 1.6
HOXA11-202ENST00000517402 PLEKHG5O94827 1062 aa25.04■■□□□ 1.6
HOXA11-202ENST00000517402 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
HOXA11-202ENST00000517402 ZBTB40Q9NUA8 1239 aa25.04■■□□□ 1.6
HOXA11-202ENST00000517402 PDZRN3Q9UPQ7 1066 aa25.04■■□□□ 1.6
HOXA11-202ENST00000517402 NOP58Q9Y2X3 529 aaKnown RBP25.04■■□□□ 1.6
HOXA11-202ENST00000517402 USHBP1Q8N6Y0 703 aa25.03■■□□□ 1.6
HOXA11-202ENST00000517402 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
HOXA11-202ENST00000517402 VIRMAQ69YN4 1812 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms