RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 BAG4O95429 457 aaKnown RBP12.4□□□□□ -0.42
SMG7-215ENST00000515829 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
SMG7-215ENST00000515829 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
SMG7-215ENST00000515829 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
SMG7-215ENST00000515829 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
SMG7-215ENST00000515829 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
SMG7-215ENST00000515829 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
SMG7-215ENST00000515829 ZSCAN30Q86W11 494 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 FIBPO43427 364 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 MBD3O95983 291 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 TPM2P07951 284 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
SMG7-215ENST00000515829 TEFQ10587 303 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
SMG7-215ENST00000515829 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
SMG7-215ENST00000515829 GNAI3P08754 354 aa12.38□□□□□ -0.43
SMG7-215ENST00000515829 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
SMG7-215ENST00000515829 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
SMG7-215ENST00000515829 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
SMG7-215ENST00000515829 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
SMG7-215ENST00000515829 IL16Q14005 1332 aa12.38□□□□□ -0.43
SMG7-215ENST00000515829 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 NSD2O96028 1365 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 CLCN1P35523 988 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 NLRP6P59044 892 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
SMG7-215ENST00000515829 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
SMG7-215ENST00000515829 ZKSCAN1P17029 563 aaPredicted RBP12.37□□□□□ -0.43
SMG7-215ENST00000515829 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
SMG7-215ENST00000515829 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
SMG7-215ENST00000515829 MAST1Q9Y2H9 1570 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 VAMP4O75379 141 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
SMG7-215ENST00000515829 RUFY2Q8WXA3 655 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 SNX21Q969T3 373 aa12.36□□□□□ -0.43
SMG7-215ENST00000515829 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
SMG7-215ENST00000515829 MCM2P49736 904 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 H3BQV1 296 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 FOSBP53539 338 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 A0A1W2PP64 1363 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
SMG7-215ENST00000515829 SDSP20132 328 aa12.35□□□□□ -0.43
SMG7-215ENST00000515829 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 USP19O94966 1318 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
SMG7-215ENST00000515829 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 MEIS3Q99687 375 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 PTPRTO14522 1441 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 UQCRHP07919 91 aa12.34□□□□□ -0.43
SMG7-215ENST00000515829 SAMD9LQ8IVG5 1584 aa12.33□□□□□ -0.43
SMG7-215ENST00000515829 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
SMG7-215ENST00000515829 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 CNTROBQ8N137 903 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 FBXW7Q969H0 707 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.44
SMG7-215ENST00000515829 ZSCAN23Q3MJ62 389 aa12.33□□□□□ -0.44
SMG7-215ENST00000515829 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
SMG7-215ENST00000515829 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 ARHGEF5Q12774 1597 aa12.32□□□□□ -0.44
SMG7-215ENST00000515829 MX1P20591 662 aa12.32□□□□□ -0.44
SMG7-215ENST00000515829 CWC27Q6UX04 472 aaKnown RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
SMG7-215ENST00000515829 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
SMG7-215ENST00000515829 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
SMG7-215ENST00000515829 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
SMG7-215ENST00000515829 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
SMG7-215ENST00000515829 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
SMG7-215ENST00000515829 WDR33Q9C0J8 1336 aaKnown RBP12.31□□□□□ -0.44
SMG7-215ENST00000515829 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
SMG7-215ENST00000515829 G3BP1Q13283 466 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMG7-215ENST00000515829 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms