RNA–Protein interactions for RNA: ENST00000515794.1

AFDN-222, Transcript of afadin, adherens junction formation factor, human

TSL 3

Gene AFDN, Length 746 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-222	ENST00000515794	ESCO1	Q5FWF5	840 aa		13.71	□□□□□ -0.21
AFDN-222	ENST00000515794	NBR1	Q14596	966 aa		13.7	□□□□□ -0.22
AFDN-222	ENST00000515794	RGL3	Q3MIN7	710 aa		13.7	□□□□□ -0.22
AFDN-222	ENST00000515794	TRPC5	Q9UL62	973 aa	Predicted RBP	13.7	□□□□□ -0.22
AFDN-222	ENST00000515794	NALCN	Q8IZF0	1738 aa		13.7	□□□□□ -0.22
AFDN-222	ENST00000515794	SLC34A2	O95436	690 aa		13.69	□□□□□ -0.22
AFDN-222	ENST00000515794	ADAMTS2	O95450	1211 aa		13.69	□□□□□ -0.22
AFDN-222	ENST00000515794	SETD1A	O15047	1707 aa	Known RBP	13.68	□□□□□ -0.22
AFDN-222	ENST00000515794	CDC42BPG	Q6DT37	1551 aa		13.68	□□□□□ -0.22
AFDN-222	ENST00000515794	DPYSL4	O14531	572 aa		13.68	□□□□□ -0.22
AFDN-222	ENST00000515794	OXER1	Q8TDS5	423 aa		13.68	□□□□□ -0.22
AFDN-222	ENST00000515794	USP21	Q9UK80	565 aa		13.68	□□□□□ -0.22
AFDN-222	ENST00000515794	PIK3C2G	O75747	1445 aa		13.67	□□□□□ -0.22
AFDN-222	ENST00000515794	C14orf93	Q9H972	538 aa	Known RBP	13.67	□□□□□ -0.22
AFDN-222	ENST00000515794	FOXO3	O43524	673 aa		13.66	□□□□□ -0.22
AFDN-222	ENST00000515794	WAPL	Q7Z5K2	1190 aa		13.66	□□□□□ -0.22
AFDN-222	ENST00000515794	PTCD2	Q8WV60	388 aa	Known RBP	13.66	□□□□□ -0.22
AFDN-222	ENST00000515794	STK26	Q9P289	416 aa		13.66	□□□□□ -0.22
AFDN-222	ENST00000515794	MYOM2	P54296	1465 aa		13.66	□□□□□ -0.22
AFDN-222	ENST00000515794	RGS12	O14924	1447 aa		13.65	□□□□□ -0.22
AFDN-222	ENST00000515794	MAP3K9	P80192	1104 aa		13.65	□□□□□ -0.22
AFDN-222	ENST00000515794	STAC3	Q96MF2	364 aa		13.65	□□□□□ -0.22
AFDN-222	ENST00000515794	PPL	O60437	1756 aa		13.65	□□□□□ -0.22
AFDN-222	ENST00000515794	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	PXDN	Q92626	1479 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	DHX57	Q6P158	1386 aa	Known RBP	13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	ATAD2	Q6PL18	1390 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	HOXB3	P14651	431 aa	Predicted RBP	13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	DOK7	Q18PE1	504 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	TMEM132E	Q6IEE7	984 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	CCDC125	Q86Z20	511 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	ATRN	O75882	1429 aa		13.64	□□□□□ -0.23
AFDN-222	ENST00000515794	PSME1	Q06323	249 aa		13.63	□□□□□ -0.23
AFDN-222	ENST00000515794	SPATA31A3	Q5VYP0	1347 aa		13.63	□□□□□ -0.23
AFDN-222	ENST00000515794	NRXN1	Q9ULB1	1477 aa		13.62	□□□□□ -0.23
AFDN-222	ENST00000515794	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.62	□□□□□ -0.23
AFDN-222	ENST00000515794	TBC1D12	O60347	775 aa		13.62	□□□□□ -0.23
AFDN-222	ENST00000515794	SNPH	O15079	494 aa		13.61	□□□□□ -0.23
AFDN-222	ENST00000515794	HRC	P23327	699 aa		13.61	□□□□□ -0.23
AFDN-222	ENST00000515794	BCL9L	Q86UU0	1499 aa		13.61	□□□□□ -0.23
AFDN-222	ENST00000515794	PLEKHH1	Q9ULM0	1364 aa		13.6	□□□□□ -0.23
AFDN-222	ENST00000515794	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.6	□□□□□ -0.23
AFDN-222	ENST00000515794	KRT28	Q7Z3Y7	464 aa		13.6	□□□□□ -0.23
AFDN-222	ENST00000515794	GJD4	Q96KN9	370 aa	Predicted RBP	13.6	□□□□□ -0.23
AFDN-222	ENST00000515794	PDIA6	Q15084	440 aa		13.59	□□□□□ -0.23
AFDN-222	ENST00000515794	UNC5CL	Q8IV45	518 aa		13.59	□□□□□ -0.23
AFDN-222	ENST00000515794	PCDHGA4	Q9Y5G9	962 aa		13.59	□□□□□ -0.23
AFDN-222	ENST00000515794	NUTM2F	A1L443	756 aa		13.58	□□□□□ -0.24
AFDN-222	ENST00000515794	XPC	Q01831	940 aa	Predicted RBP	13.58	□□□□□ -0.24
AFDN-222	ENST00000515794	CFAP70	Q5T0N1	1121 aa		13.58	□□□□□ -0.24
AFDN-222	ENST00000515794	SBNO1	A3KN83	1393 aa		13.58	□□□□□ -0.24
AFDN-222	ENST00000515794	RIMBP2	O15034	1052 aa		13.57	□□□□□ -0.24
AFDN-222	ENST00000515794	SEMA3E	O15041	775 aa		13.57	□□□□□ -0.24
AFDN-222	ENST00000515794	KNDC1	Q76NI1	1749 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	ZNF710	Q8N1W2	664 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	PRAM1	Q96QH2	718 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	POGK	Q9P215	609 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	ARHGEF10	O15013	1369 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	EIF3A	Q14152	1382 aa	Known RBP	13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	ANKAR	Q7Z5J8	1434 aa		13.56	□□□□□ -0.24
AFDN-222	ENST00000515794	SLIT2	O94813	1529 aa		13.55	□□□□□ -0.24
AFDN-222	ENST00000515794	DLC1	Q96QB1	1528 aa		13.55	□□□□□ -0.24
AFDN-222	ENST00000515794	ZSWIM6	Q9HCJ5	1215 aa		13.55	□□□□□ -0.24
AFDN-222	ENST00000515794	TNS3	Q68CZ2	1445 aa		13.55	□□□□□ -0.24
AFDN-222	ENST00000515794	IFT172	Q9UG01	1749 aa		13.54	□□□□□ -0.24
AFDN-222	ENST00000515794	ONECUT3	O60422	494 aa	Predicted RBP	13.54	□□□□□ -0.24
AFDN-222	ENST00000515794	EVI5	O60447	810 aa		13.54	□□□□□ -0.24
AFDN-222	ENST00000515794	RAB3GAP2	Q9H2M9	1393 aa		13.54	□□□□□ -0.24
AFDN-222	ENST00000515794	KIF1A	Q12756	1690 aa		13.53	□□□□□ -0.24
AFDN-222	ENST00000515794	VPS72	Q15906	364 aa		13.53	□□□□□ -0.24
AFDN-222	ENST00000515794	TESPA1	A2RU30	521 aa	Predicted RBP	13.52	□□□□□ -0.25
AFDN-222	ENST00000515794	ARSI	Q5FYB1	569 aa		13.52	□□□□□ -0.25
AFDN-222	ENST00000515794	GPR153	Q6NV75	609 aa		13.52	□□□□□ -0.25
AFDN-222	ENST00000515794	FMN2	Q9NZ56	1722 aa		13.51	□□□□□ -0.25
AFDN-222	ENST00000515794	RALGAPB	Q86X10	1494 aa		13.5	□□□□□ -0.25
AFDN-222	ENST00000515794	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	7e-7	■□□□□ 9.1
AFDN-222	ENST00000515794	GPRASP1	Q5JY77	1395 aa		13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	WASL	O00401	505 aa	Predicted RBP	13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	DCAF11	Q8TEB1	546 aa		13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	TRAK1	Q9UPV9	953 aa		13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	ADGRB1	O14514	1584 aa		13.49	□□□□□ -0.25
AFDN-222	ENST00000515794	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
AFDN-222	ENST00000515794	BLM	P54132	1417 aa	Predicted RBP	13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	NUDT7	P0C024	238 aa		13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	MLLT3	P42568	568 aa	Predicted RBP	13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	LMOD2	Q6P5Q4	547 aa		13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	SEPT12	Q8IYM1	358 aa		13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	PMFBP1	Q8TBY8	1022 aa		13.47	□□□□□ -0.25
AFDN-222	ENST00000515794	ADGRB2	O60241	1585 aa		13.46	□□□□□ -0.25
AFDN-222	ENST00000515794	FAM83G	A6ND36	823 aa		13.46	□□□□□ -0.25
AFDN-222	ENST00000515794	PTGER2	P43116	358 aa		13.46	□□□□□ -0.25
AFDN-222	ENST00000515794	CABLES1	Q8TDN4	633 aa		13.46	□□□□□ -0.25
AFDN-222	ENST00000515794	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.46	□□□□□ -0.25
AFDN-222	ENST00000515794	USP32	Q8NFA0	1604 aa		13.46	□□□□□ -0.26
AFDN-222	ENST00000515794	SF3B2	Q13435	895 aa	Known RBP	13.45	□□□□□ -0.26
AFDN-222	ENST00000515794	SMYD5	Q6GMV2	418 aa		13.45	□□□□□ -0.26
AFDN-222	ENST00000515794	HOXB1	P14653	301 aa	Predicted RBP	13.44	□□□□□ -0.26
AFDN-222	ENST00000515794	KRT27	Q7Z3Y8	459 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms