RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 NLRP6P59044 892 aa10.39□□□□□ -0.75
HMGXB3-204ENST00000513318 NME9Q86XW9 330 aa10.39□□□□□ -0.75
HMGXB3-204ENST00000513318 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
HMGXB3-204ENST00000513318 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
HMGXB3-204ENST00000513318 ABCC6O95255 1503 aa10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 LRP6O75581 1613 aa10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 FYB1O15117 783 aa10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 PER1O15534 1290 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 NRAPQ86VF7 1730 aa10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
HMGXB3-204ENST00000513318 MIER1Q8N108 512 aa10.37□□□□□ -0.75
HMGXB3-204ENST00000513318 COG3Q96JB2 828 aa10.37□□□□□ -0.75
HMGXB3-204ENST00000513318 GGNBP2Q9H3C7 697 aa10.37□□□□□ -0.75
HMGXB3-204ENST00000513318 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
HMGXB3-204ENST00000513318 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
HMGXB3-204ENST00000513318 NUTM2GQ5VZR2 741 aa10.36□□□□□ -0.75
HMGXB3-204ENST00000513318 PEAK1Q9H792 1746 aa10.36□□□□□ -0.75
HMGXB3-204ENST00000513318 RGPD2P0DJD1 1756 aa10.35□□□□□ -0.75
HMGXB3-204ENST00000513318 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
HMGXB3-204ENST00000513318 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
HMGXB3-204ENST00000513318 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
HMGXB3-204ENST00000513318 CPDO75976 1380 aa10.35□□□□□ -0.75
HMGXB3-204ENST00000513318 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
HMGXB3-204ENST00000513318 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
HMGXB3-204ENST00000513318 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
HMGXB3-204ENST00000513318 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
HMGXB3-204ENST00000513318 GCP02774 474 aa10.33□□□□□ -0.76
HMGXB3-204ENST00000513318 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-204ENST00000513318 AATKQ6ZMQ8 1374 aa10.33□□□□□ -0.76
HMGXB3-204ENST00000513318 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-204ENST00000513318 RTL1A6NKG5 1358 aa10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 CC2D1BQ5T0F9 858 aaKnown RBP10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
HMGXB3-204ENST00000513318 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 PARD3Q8TEW0 1356 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 SOX12O15370 315 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 MORC1Q86VD1 984 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 SLIT2O94813 1529 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
HMGXB3-204ENST00000513318 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 ADAMTS2O95450 1211 aa10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 MEX3CQ5U5Q3 659 aaKnown RBP10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 ARHGEF25Q86VW2 580 aa10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
HMGXB3-204ENST00000513318 FLT4P35916 1363 aa10.29□□□□□ -0.76
HMGXB3-204ENST00000513318 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
HMGXB3-204ENST00000513318 RGPD1P0DJD0 1748 aa10.29□□□□□ -0.76
HMGXB3-204ENST00000513318 MAP3K19Q56UN5 1328 aa10.29□□□□□ -0.76
HMGXB3-204ENST00000513318 COL5A2P05997 1499 aaPredicted RBP10.29□□□□□ -0.76
HMGXB3-204ENST00000513318 RRS1Q15050 365 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-204ENST00000513318 RALBP1Q15311 655 aa10.28□□□□□ -0.76
HMGXB3-204ENST00000513318 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
HMGXB3-204ENST00000513318 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-204ENST00000513318 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-204ENST00000513318 VIRMAQ69YN4 1812 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-204ENST00000513318 PARP4Q9UKK3 1724 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-204ENST00000513318 ZBTB7CA1YPR0 619 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 FBLN1P23142 703 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 HOXC9P31274 260 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 AMPHP49418 695 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 CHRNA2Q15822 529 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 FNBP4Q8N3X1 1017 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 NGLY1Q96IV0 654 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 POLKQ9UBT6 870 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 INSRP06213 1382 aa10.26□□□□□ -0.77
HMGXB3-204ENST00000513318 COL3A1P02461 1466 aaPredicted RBP10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 BCL9LQ86UU0 1499 aa10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 IP6K1Q92551 441 aa10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 BTG4Q9NY30 223 aa10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 AFF2P51816 1311 aa10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
HMGXB3-204ENST00000513318 GLI3P10071 1580 aa10.24□□□□□ -0.77
HMGXB3-204ENST00000513318 ANP32CO43423 234 aa10.24□□□□□ -0.77
HMGXB3-204ENST00000513318 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
HMGXB3-204ENST00000513318 ERBB3P21860 1342 aa10.24□□□□□ -0.77
HMGXB3-204ENST00000513318 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 PPM1GO15355 546 aaPredicted RBP10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 MTHFSP49914 203 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 USP21Q9UK80 565 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 ATRNO75882 1429 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 CRB1P82279 1406 aa10.23□□□□□ -0.77
HMGXB3-204ENST00000513318 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 PKD1L3Q7Z443 1732 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 SHANK3Q9BYB0 1731 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 ZNF772Q68DY9 489 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms