RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 FSHRP23945 695 aa10.83□□□□□ -0.68
CHD1-209ENST00000512844 NR5A1Q13285 461 aa10.83□□□□□ -0.68
CHD1-209ENST00000512844 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
CHD1-209ENST00000512844 TOR4AQ9NXH8 423 aa10.83□□□□□ -0.68
CHD1-209ENST00000512844 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
CHD1-209ENST00000512844 KCTD15Q96SI1 283 aaPredicted RBP10.82□□□□□ -0.68
CHD1-209ENST00000512844 J3QL48 77 aa10.8□□□□□ -0.68
CHD1-209ENST00000512844 RAB15P59190 212 aa10.8□□□□□ -0.68
CHD1-209ENST00000512844 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
CHD1-209ENST00000512844 TRAK2O60296 914 aa10.79□□□□□ -0.68
CHD1-209ENST00000512844 NNTQ13423 1086 aa10.79□□□□□ -0.68
CHD1-209ENST00000512844 SLFNL1Q499Z3 407 aa10.79□□□□□ -0.68
CHD1-209ENST00000512844 DGAT1O75907 488 aa10.78□□□□□ -0.68
CHD1-209ENST00000512844 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
CHD1-209ENST00000512844 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
CHD1-209ENST00000512844 FNBP4Q8N3X1 1017 aaPredicted RBP10.78□□□□□ -0.68
CHD1-209ENST00000512844 ESF1Q9H501 851 aaKnown RBP10.78□□□□□ -0.68
CHD1-209ENST00000512844 SMPD1P17405 629 aa10.77□□□□□ -0.69
CHD1-209ENST00000512844 CCDC116Q8IYX3 515 aa10.77□□□□□ -0.69
CHD1-209ENST00000512844 POM121CA8CG34 1229 aa10.76□□□□□ -0.69
CHD1-209ENST00000512844 CALR3Q96L12 384 aaKnown RBP10.76□□□□□ -0.69
CHD1-209ENST00000512844 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
CHD1-209ENST00000512844 GRM5P41594 1212 aa10.75□□□□□ -0.69
CHD1-209ENST00000512844 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
CHD1-209ENST00000512844 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
CHD1-209ENST00000512844 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
CHD1-209ENST00000512844 CEP126Q9P2H0 1117 aa10.75□□□□□ -0.69
CHD1-209ENST00000512844 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
CHD1-209ENST00000512844 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
CHD1-209ENST00000512844 Q6ZNB5 142 aa10.74□□□□□ -0.69
CHD1-209ENST00000512844 GLMNQ92990 594 aa10.74□□□□□ -0.69
CHD1-209ENST00000512844 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
CHD1-209ENST00000512844 WDR4P57081 412 aaKnown RBP10.73□□□□□ -0.69
CHD1-209ENST00000512844 ESPNB1AK53 854 aa10.72□□□□□ -0.69
CHD1-209ENST00000512844 HPS1Q92902 700 aa10.72□□□□□ -0.69
CHD1-209ENST00000512844 ALG2Q9H553 416 aa10.72□□□□□ -0.69
CHD1-209ENST00000512844 PPP1R26Q5T8A7 1209 aaPredicted RBP10.71□□□□□ -0.69
CHD1-209ENST00000512844 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
CHD1-209ENST00000512844 NR3C2P08235 984 aa10.7□□□□□ -0.7
CHD1-209ENST00000512844 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
CHD1-209ENST00000512844 DOLKQ9UPQ8 538 aa10.7□□□□□ -0.7
CHD1-209ENST00000512844 PCDHB11Q9Y5F2 797 aa10.7□□□□□ -0.7
CHD1-209ENST00000512844 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
CHD1-209ENST00000512844 CAPN5O15484 640 aaPredicted RBP10.69□□□□□ -0.7
CHD1-209ENST00000512844 ZIC2O95409 532 aaPredicted RBP10.69□□□□□ -0.7
CHD1-209ENST00000512844 AXIN1O15169 862 aa10.68□□□□□ -0.7
CHD1-209ENST00000512844 MYCP01106 439 aaPredicted RBP10.68□□□□□ -0.7
CHD1-209ENST00000512844 MYT1Q01538 1121 aa10.68□□□□□ -0.7
CHD1-209ENST00000512844 UPP2O95045 317 aa10.67□□□□□ -0.7
CHD1-209ENST00000512844 AVPP01185 164 aa10.67□□□□□ -0.7
CHD1-209ENST00000512844 SKIP12755 728 aa10.67□□□□□ -0.7
CHD1-209ENST00000512844 MAP7D1Q3KQU3 841 aa10.67□□□□□ -0.7
CHD1-209ENST00000512844 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
CHD1-209ENST00000512844 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
CHD1-209ENST00000512844 CCDC97Q96F63 343 aaPredicted RBP10.66□□□□□ -0.7
CHD1-209ENST00000512844 TIMP2P16035 220 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 OXLD1Q5BKU9 147 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 PLPP7Q8NBV4 271 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 NFATC2IPQ8NCF5 419 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 CYLDQ9NQC7 956 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
CHD1-209ENST00000512844 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
CHD1-209ENST00000512844 ADAMTS19Q8TE59 1207 aa10.64□□□□□ -0.71
CHD1-209ENST00000512844 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
CHD1-209ENST00000512844 USP4Q13107 963 aa10.63□□□□□ -0.71
CHD1-209ENST00000512844 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
CHD1-209ENST00000512844 LZTS3O60299 673 aaPredicted RBP10.62□□□□□ -0.71
CHD1-209ENST00000512844 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
CHD1-209ENST00000512844 EML3Q32P44 896 aa10.62□□□□□ -0.71
CHD1-209ENST00000512844 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
CHD1-209ENST00000512844 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 PIK3CDO00329 1044 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 SCARF1Q14162 830 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 CRIPAKQ8N1N5 446 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
CHD1-209ENST00000512844 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
CHD1-209ENST00000512844 ATP9BO43861 1147 aa10.6□□□□□ -0.71
CHD1-209ENST00000512844 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
CHD1-209ENST00000512844 SERPINA10Q9UK55 444 aa10.6□□□□□ -0.71
CHD1-209ENST00000512844 ST8SIA5O15466 376 aa10.59□□□□□ -0.71
CHD1-209ENST00000512844 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
CHD1-209ENST00000512844 KLF16Q9BXK1 252 aaPredicted RBP10.59□□□□□ -0.71
CHD1-209ENST00000512844 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
CHD1-209ENST00000512844 ERVK-9P63128 1117 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 CBLBQ13191 982 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 TBC1D9Q6ZT07 1266 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 UCN2Q96RP3 112 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 PPP1R12CQ9BZL4 782 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
CHD1-209ENST00000512844 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
CHD1-209ENST00000512844 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
CHD1-209ENST00000512844 ADH1AP07327 375 aa10.57□□□□□ -0.72
CHD1-209ENST00000512844 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
CHD1-209ENST00000512844 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
CHD1-209ENST00000512844 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
CHD1-209ENST00000512844 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 BMP2P12643 396 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms