RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 AXIN2Q9Y2T1 843 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 MINK1Q8N4C8 1332 aaPredicted RBP6.13□□□□□ -1.43
MATR3-219ENST00000512040 ZNF644Q9H582 1327 aaPredicted RBP6.13□□□□□ -1.43
MATR3-219ENST00000512040 PZPP20742 1482 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 SHANK2Q9UPX8 1470 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 CPS1P31327 1500 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 PPP1R3GB7ZBB8 358 aa6.12□□□□□ -1.43
MATR3-219ENST00000512040 FAM161AQ3B820 660 aa6.12□□□□□ -1.43
MATR3-219ENST00000512040 ZNF787Q6DD87 383 aa6.12□□□□□ -1.43
MATR3-219ENST00000512040 CDCA7LQ96GN5 454 aa6.12□□□□□ -1.43
MATR3-219ENST00000512040 KIAA1107Q9UPP5 1409 aa6.12□□□□□ -1.43
MATR3-219ENST00000512040 EHBP1L1Q8N3D4 1523 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 LRRC7Q96NW7 1537 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 MED14O60244 1454 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 CEP162Q5TB80 1403 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 SPAG9O60271 1321 aaKnown RBP6.11□□□□□ -1.43
MATR3-219ENST00000512040 IRF6O14896 467 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 MAFGO15525 162 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 PRSS12P56730 875 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 TMCO4Q5TGY1 634 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 POTEEQ6S8J3 1075 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 CCDC125Q86Z20 511 aa6.11□□□□□ -1.43
MATR3-219ENST00000512040 ABCC3O15438 1527 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 CAMSAP2Q08AD1 1489 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 ARHGAP33O14559 1287 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 TRIM66O15016 1216 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 PTMSP20962 102 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
MATR3-219ENST00000512040 PROX2Q3B8N5 592 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 FBXO31Q5XUX0 539 aaPredicted RBP6.1□□□□□ -1.43
MATR3-219ENST00000512040 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
MATR3-219ENST00000512040 PLCD4Q9BRC7 762 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 ZNF777Q9ULD5 760 aaPredicted RBP6.1□□□□□ -1.43
MATR3-219ENST00000512040 UGGT1Q9NYU2 1555 aa6.1□□□□□ -1.43
MATR3-219ENST00000512040 MTUS2Q5JR59 1369 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.09□□□□□ -1.43
MATR3-219ENST00000512040 PBX2P40425 430 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 MFAP1P55081 439 aaKnown RBP6.09□□□□□ -1.43
MATR3-219ENST00000512040 NEUROD2Q15784 382 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 GRIPAP1Q4V328 841 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 DMRTA1Q5VZB9 504 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 PRDM16Q9HAZ2 1276 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 USP35Q9P2H5 1018 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 RBM27Q9P2N5 1060 aaKnown RBP6.09□□□□□ -1.43
MATR3-219ENST00000512040 FAM198AQ9UFP1 575 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 TSKSQ9UJT2 592 aa6.09□□□□□ -1.43
MATR3-219ENST00000512040 MAP3K1Q13233 1512 aa6.09□□□□□ -1.44
MATR3-219ENST00000512040 FAM135AQ9P2D6 1515 aa6.09□□□□□ -1.44
MATR3-219ENST00000512040 NCOA2Q15596 1464 aa6.09□□□□□ -1.44
MATR3-219ENST00000512040 TNRQ92752 1358 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 CFAP65Q6ZU64 1925 aaKnown RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 TRIM6-TRIM34B2RNG4 842 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 PPM1GO15355 546 aaPredicted RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 MCCP23508 829 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 PIP4K2BP78356 416 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 IRX6P78412 446 aaPredicted RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 RBM10P98175 930 aaKnown RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 CCDC27Q2M243 656 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 GGT6Q6P531 493 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 TTC13Q8NBP0 860 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 ZNF428Q96B54 188 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 RGS17Q9UGC6 210 aaPredicted RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 ADGRG1Q9Y653 693 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 ARHGEF5Q12774 1597 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 MAST1Q9Y2H9 1570 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 ERVK-7P63135 1459 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 CCDC141Q6ZP82 1450 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 RTEL1-TNFRSF6BF6WH68 1400 aa6.08□□□□□ -1.44
MATR3-219ENST00000512040 NPHP4O75161 1426 aaPredicted RBP6.08□□□□□ -1.44
MATR3-219ENST00000512040 CROCC2H7BZ55 1655 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 CCNB3Q8WWL7 1395 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 PIK3C2BO00750 1634 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 EIF2AK4Q9P2K8 1649 aaKnown RBP6.07□□□□□ -1.44
MATR3-219ENST00000512040 PDE4DQ08499 809 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 GLIPR1L2Q4G1C9 344 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 FOXD4L5Q5VV16 416 aaPredicted RBP6.07□□□□□ -1.44
MATR3-219ENST00000512040 NLRP7Q8WX94 980 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 FOXD4L4Q8WXT5 416 aaPredicted RBP6.07□□□□□ -1.44
MATR3-219ENST00000512040 ZBED2Q9BTP6 218 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 ROBO1Q9Y6N7 1651 aa6.07□□□□□ -1.44
MATR3-219ENST00000512040 DHX29Q7Z478 1369 aaKnown RBP6.06□□□□□ -1.44
MATR3-219ENST00000512040 A0A0U1RQG5 324 aaPredicted RBP6.06□□□□□ -1.44
MATR3-219ENST00000512040 C3orf80F5H4A9 247 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 SMAPO00193 183 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 APBB1O00213 710 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 PACS2Q86VP3 889 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 PHOX2BQ99453 314 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 ESF1Q9H501 851 aaKnown RBP6.06□□□□□ -1.44
MATR3-219ENST00000512040 GPBP1L1Q9HC44 474 aaPredicted RBP6.06□□□□□ -1.44
MATR3-219ENST00000512040 PNMA3Q9UL41 463 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 NLRP1Q9C000 1473 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 ARHGAP23Q9P227 1491 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 VPS8Q8N3P4 1428 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 EP400Q96L91 3159 aa6.06□□□□□ -1.44
MATR3-219ENST00000512040 SLIT1O75093 1534 aa6.05□□□□□ -1.44
MATR3-219ENST00000512040 PRDM15P57071 1507 aaPredicted RBP6.05□□□□□ -1.44
MATR3-219ENST00000512040 MYO5BQ9ULV0 1848 aa6.05□□□□□ -1.44
MATR3-219ENST00000512040 NBPF26B4DH59 902 aa6.05□□□□□ -1.44
MATR3-219ENST00000512040 OATP04181 439 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms