RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GRIPAP1Q4V328 841 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 RTF1Q92541 710 aaKnown RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 SPHKAPQ2M3C7 1700 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 MST1RQ04912 1400 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 PLEKHG3A1L390 1219 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 AMOTQ4VCS5 1084 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 TMEM132EQ6IEE7 984 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 KNSTRNQ9Y448 316 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 SPATA31A5Q5VU36 1347 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 SPATA31A7Q8IWB4 1347 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 ASXL1Q8IXJ9 1541 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 GCP02774 474 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 CFAP70Q5T0N1 1121 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 TMOD3Q9NYL9 352 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 CEP152O94986 1710 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 XIRP1Q702N8 1843 aaKnown RBP3.79□□□□□ -1.8
CLOCK-209ENST00000511124 PSDA5PKW4 1024 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-209ENST00000511124 WAPLQ7Z5K2 1190 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 ZCRB1Q8TBF4 217 aaKnown RBP3.79□□□□□ -1.8
CLOCK-209ENST00000511124 NEURL4Q96JN8 1562 aa3.79□□□□□ -1.8
CLOCK-209ENST00000511124 PIK3C2BO00750 1634 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 LMOD1P29536 600 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 RFC4P35249 363 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 APLP1P51693 650 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 DDX54Q8TDD1 881 aaKnown RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 CCNL1Q9UK58 526 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 ATRNO75882 1429 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 UNC13BO14795 1591 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 KTN1Q86UP2 1357 aaKnown RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 RTCBQ9Y3I0 505 aaKnown RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 KIF1AQ12756 1690 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 ACEP12821 1306 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 GCC2Q8IWJ2 1684 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 CFAP65Q6ZU64 1925 aaKnown RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 PPM1GO15355 546 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-209ENST00000511124 STARD3NLO95772 234 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 CD2APQ9Y5K6 639 aa3.78□□□□□ -1.8
CLOCK-209ENST00000511124 PPIP5K1Q6PFW1 1433 aa3.78□□□□□ -1.81
CLOCK-209ENST00000511124 LTV1Q96GA3 475 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-209ENST00000511124 HDAC5Q9UQL6 1122 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 KIF1BO60333 1816 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 ROBO1Q9Y6N7 1651 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 IQCA1LA6NCM1 817 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 TEFQ10587 303 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 PPARGC1BQ86YN6 1023 aaKnown RBP3.77□□□□□ -1.81
CLOCK-209ENST00000511124 SPATA31A1Q5TZJ5 1347 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 WDR17Q8IZU2 1322 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 PCDH11XQ9BZA7 1347 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 PCDH11YQ9BZA8 1340 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 ADAMTS13Q76LX8 1427 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 ECE1P42892 770 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 CALD1Q05682 793 aaKnown RBP3.77□□□□□ -1.81
CLOCK-209ENST00000511124 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 SLC15A2Q16348 729 aa3.77□□□□□ -1.81
CLOCK-209ENST00000511124 PDE6BP35913 854 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CABP4P57796 275 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 ST5P78524 1137 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CHRNA2Q15822 529 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 TXNRD1Q16881 649 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 TRAPPC3LQ5T215 181 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CC2D2BQ6DHV5 1058 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 DEFB132Q7Z7B7 95 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 IFNL2Q8IZJ0 200 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 UBR1Q8IWV7 1749 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CRB1P82279 1406 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.76□□□□□ -1.81
CLOCK-209ENST00000511124 SUPT20HQ8NEM7 779 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 SETBP1Q9Y6X0 1596 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 METP08581 1390 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 PLEKHG2Q9H7P9 1386 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 NUTM2GQ5VZR2 741 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 PAXIP1Q6ZW49 1069 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-209ENST00000511124 MORC1Q86VD1 984 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 PNISRQ8TF01 805 aaKnown RBP3.76□□□□□ -1.81
CLOCK-209ENST00000511124 JDP2Q8WYK2 163 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 ONECUT3O60422 494 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-209ENST00000511124 FCHSD2O94868 740 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 NF2P35240 595 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CDC42BPGQ6DT37 1551 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CCER1Q8TC90 406 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-209ENST00000511124 CABLES1Q8TDN4 633 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 ANKRD24Q8TF21 1146 aa3.76□□□□□ -1.81
CLOCK-209ENST00000511124 RGPD3A6NKT7 1758 aaPredicted RBP3.75□□□□□ -1.81
CLOCK-209ENST00000511124 RGPD4Q7Z3J3 1758 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 CLSPNQ9HAW4 1339 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 ARHGAP27Q6ZUM4 889 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 CNKSR1Q969H4 720 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 RBM42Q9BTD8 480 aaKnown RBP3.75□□□□□ -1.81
CLOCK-209ENST00000511124 TTC21BQ7Z4L5 1316 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 ADGRF5Q8IZF2 1346 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 MAPK8IP3Q9UPT6 1336 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 KIF24Q5T7B8 1368 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 KIAA0232Q92628 1395 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 TECPR2O15040 1411 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 POLA2Q14181 598 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 SMC1BQ8NDV3 1235 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 GAS2L2Q8NHY3 880 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 CABP1Q9NZU7 370 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 CLEC11AQ9Y240 323 aa3.75□□□□□ -1.81
CLOCK-209ENST00000511124 ZC3H4Q9UPT8 1303 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms