RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
HTT-205ENST00000509043 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
HTT-205ENST00000509043 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
HTT-205ENST00000509043 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
HTT-205ENST00000509043 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
HTT-205ENST00000509043 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
HTT-205ENST00000509043 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
HTT-205ENST00000509043 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
HTT-205ENST00000509043 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
HTT-205ENST00000509043 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
HTT-205ENST00000509043 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
HTT-205ENST00000509043 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
HTT-205ENST00000509043 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 HMOX1P09601 288 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
HTT-205ENST00000509043 KDRP35968 1356 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 FBLN1P23142 703 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
HTT-205ENST00000509043 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
HTT-205ENST00000509043 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
HTT-205ENST00000509043 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
HTT-205ENST00000509043 NCOA3Q9Y6Q9 1424 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
HTT-205ENST00000509043 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
HTT-205ENST00000509043 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
HTT-205ENST00000509043 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
HTT-205ENST00000509043 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
HTT-205ENST00000509043 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
HTT-205ENST00000509043 AMPHP49418 695 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 NLRP6P59044 892 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 SULT6B1Q6IMI4 303 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
HTT-205ENST00000509043 RGPD8O14715 1765 aaPredicted RBP11.81□□□□□ -0.52
HTT-205ENST00000509043 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
HTT-205ENST00000509043 PDE4AP27815 886 aa11.8□□□□□ -0.52
HTT-205ENST00000509043 KCNH5Q8NCM2 988 aa11.8□□□□□ -0.52
HTT-205ENST00000509043 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
HTT-205ENST00000509043 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
HTT-205ENST00000509043 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
HTT-205ENST00000509043 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
HTT-205ENST00000509043 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
HTT-205ENST00000509043 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
HTT-205ENST00000509043 DCCP43146 1447 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 MST1RQ04912 1400 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 VAMP4O75379 141 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 TRIM27P14373 513 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
HTT-205ENST00000509043 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
HTT-205ENST00000509043 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.52
HTT-205ENST00000509043 RLBP1P12271 317 aa11.77□□□□□ -0.53
HTT-205ENST00000509043 HOXC9P31274 260 aa11.77□□□□□ -0.53
HTT-205ENST00000509043 MYT1Q01538 1121 aa11.77□□□□□ -0.53
HTT-205ENST00000509043 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
HTT-205ENST00000509043 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
HTT-205ENST00000509043 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
HTT-205ENST00000509043 CHL1O00533 1208 aa11.76□□□□□ -0.53
HTT-205ENST00000509043 PSME1Q06323 249 aa11.76□□□□□ -0.53
HTT-205ENST00000509043 HDAC1Q13547 482 aaPredicted RBP11.76□□□□□ -0.53
HTT-205ENST00000509043 TWISTNBQ3B726 338 aaPredicted RBP11.76□□□□□ -0.53
HTT-205ENST00000509043 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
HTT-205ENST00000509043 RTF1Q92541 710 aaKnown RBP11.76□□□□□ -0.53
HTT-205ENST00000509043 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
HTT-205ENST00000509043 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
HTT-205ENST00000509043 ADRA2BP18089 450 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
HTT-205ENST00000509043 IP6K1Q92551 441 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 C19orf44Q9H6X5 657 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 NFAT5O94916 1531 aa11.75□□□□□ -0.53
HTT-205ENST00000509043 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
HTT-205ENST00000509043 IGHDP01880 384 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
HTT-205ENST00000509043 EYA1Q99502 592 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 CRB1P82279 1406 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 SLIT3O75094 1523 aa11.74□□□□□ -0.53
HTT-205ENST00000509043 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
HTT-205ENST00000509043 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
HTT-205ENST00000509043 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
HTT-205ENST00000509043 C1orf167Q5SNV9 1468 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 ABCC4O15439 1325 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 PTPRCP08575 1304 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
HTT-205ENST00000509043 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
HTT-205ENST00000509043 LRRC37A3O60309 1634 aa11.71□□□□□ -0.53
HTT-205ENST00000509043 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms