RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
LIN54-207ENST00000508171 DCTN1Q14203 1278 aa13.82□□□□□ -0.2
LIN54-207ENST00000508171 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
LIN54-207ENST00000508171 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
LIN54-207ENST00000508171 GNAI1P63096 354 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 AATKQ6ZMQ8 1374 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 CDK12Q9NYV4 1490 aaPredicted RBP13.81□□□□□ -0.2
LIN54-207ENST00000508171 ZBTB7BO15156 539 aaPredicted RBP13.81□□□□□ -0.2
LIN54-207ENST00000508171 C8orf58Q8NAV2 365 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
LIN54-207ENST00000508171 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
LIN54-207ENST00000508171 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
LIN54-207ENST00000508171 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
LIN54-207ENST00000508171 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
LIN54-207ENST00000508171 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
LIN54-207ENST00000508171 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
LIN54-207ENST00000508171 ROBO2Q9HCK4 1378 aa13.8□□□□□ -0.2
LIN54-207ENST00000508171 NUCB1Q02818 461 aa13.79□□□□□ -0.2
LIN54-207ENST00000508171 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
LIN54-207ENST00000508171 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
LIN54-207ENST00000508171 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
LIN54-207ENST00000508171 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
LIN54-207ENST00000508171 KIF13AQ9H1H9 1805 aa13.79□□□□□ -0.2
LIN54-207ENST00000508171 TNRQ92752 1358 aa13.79□□□□□ -0.2
LIN54-207ENST00000508171 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
LIN54-207ENST00000508171 C22orf23Q9BZE7 217 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 ANTXR1Q9H6X2 564 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 TECPR2O15040 1411 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 C3P01024 1663 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 TMEM2Q9UHN6 1383 aa13.78□□□□□ -0.2
LIN54-207ENST00000508171 ITSN1Q15811 1721 aa13.77□□□□□ -0.2
LIN54-207ENST00000508171 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.2
LIN54-207ENST00000508171 LTKP29376 864 aa13.77□□□□□ -0.21
LIN54-207ENST00000508171 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.21
LIN54-207ENST00000508171 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
LIN54-207ENST00000508171 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
LIN54-207ENST00000508171 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
LIN54-207ENST00000508171 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
LIN54-207ENST00000508171 SIRT2Q8IXJ6 389 aa13.76□□□□□ -0.21
LIN54-207ENST00000508171 ACEP12821 1306 aa13.76□□□□□ -0.21
LIN54-207ENST00000508171 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
LIN54-207ENST00000508171 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.75□□□□□ -0.21
LIN54-207ENST00000508171 SOX12O15370 315 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 PRKCSHP14314 528 aaPredicted RBP13.75□□□□□ -0.21
LIN54-207ENST00000508171 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
LIN54-207ENST00000508171 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 SLC26A8Q96RN1 970 aa13.75□□□□□ -0.21
LIN54-207ENST00000508171 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
LIN54-207ENST00000508171 ABCC4O15439 1325 aa13.74□□□□□ -0.21
LIN54-207ENST00000508171 PIK3R4Q99570 1358 aa13.74□□□□□ -0.21
LIN54-207ENST00000508171 MCM10Q7L590 875 aa13.73□□□□□ -0.21
LIN54-207ENST00000508171 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
LIN54-207ENST00000508171 BRPF3Q9ULD4 1205 aa13.72□□□□□ -0.21
LIN54-207ENST00000508171 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
LIN54-207ENST00000508171 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.22
LIN54-207ENST00000508171 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
LIN54-207ENST00000508171 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
LIN54-207ENST00000508171 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
LIN54-207ENST00000508171 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 PEAK1Q9H792 1746 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 USP6P35125 1406 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 CHL1O00533 1208 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
LIN54-207ENST00000508171 AMOTL2Q9Y2J4 779 aa13.68□□□□□ -0.22
LIN54-207ENST00000508171 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
LIN54-207ENST00000508171 FOXO3O43524 673 aa13.67□□□□□ -0.22
LIN54-207ENST00000508171 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
LIN54-207ENST00000508171 TOPAZ1Q8N9V7 1692 aa13.67□□□□□ -0.22
LIN54-207ENST00000508171 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
LIN54-207ENST00000508171 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
LIN54-207ENST00000508171 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
LIN54-207ENST00000508171 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
LIN54-207ENST00000508171 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
LIN54-207ENST00000508171 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
LIN54-207ENST00000508171 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
LIN54-207ENST00000508171 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
LIN54-207ENST00000508171 KIF2CQ99661 725 aa13.65□□□□□ -0.22
LIN54-207ENST00000508171 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
LIN54-207ENST00000508171 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
LIN54-207ENST00000508171 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 RGS12O14924 1447 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 CHMP5Q9NZZ3 219 aa13.64□□□□□ -0.23
LIN54-207ENST00000508171 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms