RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 CFAP65Q6ZU64 1925 aaKnown RBP10.01□□□□□ -0.81
SMAD5-201ENST00000506223 FYCO1Q9BQS8 1478 aa10□□□□□ -0.81
SMAD5-201ENST00000506223 UBR1Q8IWV7 1749 aa10□□□□□ -0.81
SMAD5-201ENST00000506223 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
SMAD5-201ENST00000506223 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
SMAD5-201ENST00000506223 LRP6O75581 1613 aa10□□□□□ -0.81
SMAD5-201ENST00000506223 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
SMAD5-201ENST00000506223 POLR3EQ9NVU0 708 aa9.99□□□□□ -0.81
SMAD5-201ENST00000506223 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
SMAD5-201ENST00000506223 VPS9D1Q9Y2B5 631 aa9.99□□□□□ -0.81
SMAD5-201ENST00000506223 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
SMAD5-201ENST00000506223 KIF3BO15066 747 aa9.98□□□□□ -0.81
SMAD5-201ENST00000506223 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
SMAD5-201ENST00000506223 DHX29Q7Z478 1369 aaKnown RBP9.98□□□□□ -0.81
SMAD5-201ENST00000506223 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
SMAD5-201ENST00000506223 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
SMAD5-201ENST00000506223 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
SMAD5-201ENST00000506223 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
SMAD5-201ENST00000506223 JCADQ9P266 1359 aa9.97□□□□□ -0.81
SMAD5-201ENST00000506223 COL16A1Q07092 1604 aaPredicted RBP9.96□□□□□ -0.81
SMAD5-201ENST00000506223 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 LTKP29376 864 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 CLK2P49760 499 aaKnown RBP9.96□□□□□ -0.82
SMAD5-201ENST00000506223 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 TMEM94Q12767 1356 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 MTUS2Q5JR59 1369 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 CEP162Q5TB80 1403 aa9.96□□□□□ -0.82
SMAD5-201ENST00000506223 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
SMAD5-201ENST00000506223 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
SMAD5-201ENST00000506223 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
SMAD5-201ENST00000506223 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
SMAD5-201ENST00000506223 ZNF644Q9H582 1327 aaPredicted RBP9.95□□□□□ -0.82
SMAD5-201ENST00000506223 NCOA2Q15596 1464 aa9.95□□□□□ -0.82
SMAD5-201ENST00000506223 LRRC9Q6ZRR7 1453 aa9.94□□□□□ -0.82
SMAD5-201ENST00000506223 MBD5Q9P267 1494 aa9.94□□□□□ -0.82
SMAD5-201ENST00000506223 ZNF772Q68DY9 489 aaPredicted RBP9.94□□□□□ -0.82
SMAD5-201ENST00000506223 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
SMAD5-201ENST00000506223 ERVK-7P63135 1459 aa9.93□□□□□ -0.82
SMAD5-201ENST00000506223 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
SMAD5-201ENST00000506223 RTEL1-TNFRSF6BF6WH68 1400 aa9.93□□□□□ -0.82
SMAD5-201ENST00000506223 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
SMAD5-201ENST00000506223 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
SMAD5-201ENST00000506223 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMAD5-201ENST00000506223 SLIT1O75093 1534 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
SMAD5-201ENST00000506223 TK2O00142 265 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 RXRBP28702 533 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
SMAD5-201ENST00000506223 FLIIQ13045 1269 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 MEX3CQ5U5Q3 659 aaKnown RBP9.92□□□□□ -0.82
SMAD5-201ENST00000506223 TXNDC2Q86VQ3 553 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 CEP152O94986 1710 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 ABCC3O15438 1527 aa9.92□□□□□ -0.82
SMAD5-201ENST00000506223 CCNB3Q8WWL7 1395 aa9.91□□□□□ -0.82
SMAD5-201ENST00000506223 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
SMAD5-201ENST00000506223 LAPTM4BQ86VI4 370 aa9.91□□□□□ -0.82
SMAD5-201ENST00000506223 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
SMAD5-201ENST00000506223 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
SMAD5-201ENST00000506223 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
SMAD5-201ENST00000506223 SLC10A3P09131 477 aa9.9□□□□□ -0.82
SMAD5-201ENST00000506223 PROSER2Q86WR7 435 aaPredicted RBP9.9□□□□□ -0.82
SMAD5-201ENST00000506223 SPATA31A6Q5VVP1 1343 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 PRDM15P57071 1507 aaPredicted RBP9.89□□□□□ -0.83
SMAD5-201ENST00000506223 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 SPTLC1O15269 473 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 KDM4AO75164 1064 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 GCGRP47871 477 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■■□□ 15.4
SMAD5-201ENST00000506223 RSBN1LQ6PCB5 846 aaPredicted RBP9.89□□□□□ -0.83
SMAD5-201ENST00000506223 SAMD7Q7Z3H4 446 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 RGS12O14924 1447 aa9.89□□□□□ -0.83
SMAD5-201ENST00000506223 KCNA6P17658 529 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 PIK3C2BO00750 1634 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 NWD1Q149M9 1564 aa9.88□□□□□ -0.83
SMAD5-201ENST00000506223 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
SMAD5-201ENST00000506223 MROH1Q8NDA8 1641 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 NDUFV2P19404 249 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 USP46P62068 366 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
SMAD5-201ENST00000506223 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
SMAD5-201ENST00000506223 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 TET3O43151 1660 aa9.87□□□□□ -0.83
SMAD5-201ENST00000506223 GJA5P36382 358 aa9.86□□□□□ -0.83
SMAD5-201ENST00000506223 EP400Q96L91 3159 aa9.86□□□□□ -0.83
SMAD5-201ENST00000506223 MSH6P52701 1360 aa9.86□□□□□ -0.83
SMAD5-201ENST00000506223 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
SMAD5-201ENST00000506223 NKTRP30414 1462 aaKnown RBP9.85□□□□□ -0.83
SMAD5-201ENST00000506223 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms