RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
COL4A5-208ENST00000505728 TCP11L2Q8N4U5 519 aa10.57□□□□□ -0.72
COL4A5-208ENST00000505728 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
COL4A5-208ENST00000505728 RGS12O14924 1447 aa10.57□□□□□ -0.72
COL4A5-208ENST00000505728 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 E9PSI1 815 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 C8orf37Q96NL8 207 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 SRCAPQ6ZRS2 3230 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 OVOS2A0A0J9YW53 1432 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 OVOS2Q6IE36 1432 aa10.56□□□□□ -0.72
COL4A5-208ENST00000505728 SOS2Q07890 1332 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-208ENST00000505728 PPM1GO15355 546 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-208ENST00000505728 IL13P35225 146 aa10.55□□□□□ -0.72
COL4A5-208ENST00000505728 WWC1Q8IX03 1113 aa10.55□□□□□ -0.72
COL4A5-208ENST00000505728 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
COL4A5-208ENST00000505728 PLEKHF1Q96S99 279 aa10.55□□□□□ -0.72
COL4A5-208ENST00000505728 PPP4R2Q9NY27 417 aa10.55□□□□□ -0.72
COL4A5-208ENST00000505728 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
COL4A5-208ENST00000505728 ADAMTS2O95450 1211 aa10.54□□□□□ -0.72
COL4A5-208ENST00000505728 NEFMP07197 916 aa10.54□□□□□ -0.72
COL4A5-208ENST00000505728 FBLN1P23142 703 aa10.54□□□□□ -0.72
COL4A5-208ENST00000505728 QTRT2Q9H974 415 aaKnown RBP10.54□□□□□ -0.72
COL4A5-208ENST00000505728 PXDNQ92626 1479 aa10.54□□□□□ -0.72
COL4A5-208ENST00000505728 MAPK8IP3Q9UPT6 1336 aa10.54□□□□□ -0.72
COL4A5-208ENST00000505728 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
COL4A5-208ENST00000505728 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
COL4A5-208ENST00000505728 RRP1P56182 461 aaKnown RBP10.52□□□□□ -0.73
COL4A5-208ENST00000505728 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.73
COL4A5-208ENST00000505728 IRX6P78412 446 aaPredicted RBP10.52□□□□□ -0.73
COL4A5-208ENST00000505728 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
COL4A5-208ENST00000505728 NGLY1Q96IV0 654 aa10.52□□□□□ -0.73
COL4A5-208ENST00000505728 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
COL4A5-208ENST00000505728 NLRP6P59044 892 aa10.51□□□□□ -0.73
COL4A5-208ENST00000505728 PSME1Q06323 249 aa10.51□□□□□ -0.73
COL4A5-208ENST00000505728 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
COL4A5-208ENST00000505728 KIF24Q5T7B8 1368 aa10.51□□□□□ -0.73
COL4A5-208ENST00000505728 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.5□□□□□ -0.73
COL4A5-208ENST00000505728 ABTB2Q8N961 1025 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
COL4A5-208ENST00000505728 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
COL4A5-208ENST00000505728 IL16Q14005 1332 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 ATRNO75882 1429 aa10.5□□□□□ -0.73
COL4A5-208ENST00000505728 PRKAR2BP31323 418 aa10.49□□□□□ -0.73
COL4A5-208ENST00000505728 RIPK4P57078 832 aa10.49□□□□□ -0.73
COL4A5-208ENST00000505728 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
COL4A5-208ENST00000505728 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
COL4A5-208ENST00000505728 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
COL4A5-208ENST00000505728 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.49□□□□□ -0.73
COL4A5-208ENST00000505728 USP21Q9UK80 565 aa10.49□□□□□ -0.73
COL4A5-208ENST00000505728 BRWD3Q6RI45 1802 aa10.49□□□□□ -0.73
COL4A5-208ENST00000505728 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
COL4A5-208ENST00000505728 PIK3C2AO00443 1686 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 ABCA3Q99758 1704 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 FOXO3O43524 673 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
COL4A5-208ENST00000505728 AMPHP49418 695 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 MAP3K19Q56UN5 1328 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 NPHP3Q7Z494 1330 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 FLT4P35916 1363 aa10.48□□□□□ -0.73
COL4A5-208ENST00000505728 HMOX1P09601 288 aa10.47□□□□□ -0.73
COL4A5-208ENST00000505728 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
COL4A5-208ENST00000505728 KCNH5Q8NCM2 988 aa10.47□□□□□ -0.73
COL4A5-208ENST00000505728 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
COL4A5-208ENST00000505728 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.73
COL4A5-208ENST00000505728 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.73
COL4A5-208ENST00000505728 KRT28Q7Z3Y7 464 aa10.46□□□□□ -0.73
COL4A5-208ENST00000505728 TRPC5Q9UL62 973 aaPredicted RBP10.46□□□□□ -0.73
COL4A5-208ENST00000505728 GLI3P10071 1580 aa10.46□□□□□ -0.74
COL4A5-208ENST00000505728 PLCH1Q4KWH8 1693 aa10.46□□□□□ -0.74
COL4A5-208ENST00000505728 PEAK1Q9H792 1746 aa10.45□□□□□ -0.74
COL4A5-208ENST00000505728 PHACTR3Q96KR7 559 aa10.45□□□□□ -0.74
COL4A5-208ENST00000505728 RTL1A6NKG5 1358 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 ARHGEF10O15013 1369 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 SOX12O15370 315 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 HOXC9P31274 260 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 NUTM2GQ5VZR2 741 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
COL4A5-208ENST00000505728 SLIT2O94813 1529 aa10.43□□□□□ -0.74
COL4A5-208ENST00000505728 SPATA31A3Q5VYP0 1347 aa10.43□□□□□ -0.74
COL4A5-208ENST00000505728 IP6K1Q92551 441 aa10.43□□□□□ -0.74
COL4A5-208ENST00000505728 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-208ENST00000505728 NWD2Q9ULI1 1742 aa10.43□□□□□ -0.74
COL4A5-208ENST00000505728 RGPD1P0DJD0 1748 aa10.42□□□□□ -0.74
COL4A5-208ENST00000505728 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
COL4A5-208ENST00000505728 PLIN1O60240 522 aa10.42□□□□□ -0.74
COL4A5-208ENST00000505728 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
COL4A5-208ENST00000505728 EYA1Q99502 592 aa10.42□□□□□ -0.74
COL4A5-208ENST00000505728 USP19O94966 1318 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 RARSP54136 660 aaKnown RBP10.41□□□□□ -0.74
COL4A5-208ENST00000505728 GNAI1P63096 354 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms