RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 GDPD2Q9HCC8 539 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 IDI1Q13907 227 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 SLC52A1Q9NWF4 448 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 CHD1O14646 1710 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 C16orf71Q8IYS4 520 aaPredicted RBP9.72□□□□□ -0.85
PROM1-206ENST00000505450 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
PROM1-206ENST00000505450 CHAMP1Q96JM3 812 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 OFD1O75665 1012 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 DCTN1Q14203 1278 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 PRDM11Q9NQV5 511 aa9.72□□□□□ -0.85
PROM1-206ENST00000505450 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.85
PROM1-206ENST00000505450 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.85
PROM1-206ENST00000505450 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.85
PROM1-206ENST00000505450 POLR1AO95602 1720 aaPredicted RBP9.71□□□□□ -0.86
PROM1-206ENST00000505450 PHF14O94880 888 aa9.71□□□□□ -0.86
PROM1-206ENST00000505450 AMPHP49418 695 aa9.71□□□□□ -0.86
PROM1-206ENST00000505450 RBSNQ9H1K0 784 aa9.71□□□□□ -0.86
PROM1-206ENST00000505450 TSPY26PQ9H489 355 aa9.71□□□□□ -0.86
PROM1-206ENST00000505450 CCDC27Q2M243 656 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 ZNF830Q96NB3 372 aaPredicted RBP9.7□□□□□ -0.86
PROM1-206ENST00000505450 ADAMTS12P58397 1594 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 CERKQ8TCT0 537 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 UPF3BQ9BZI7 483 aaKnown RBP9.7□□□□□ -0.86
PROM1-206ENST00000505450 AMOTL2Q9Y2J4 779 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 MBD3O95983 291 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 CWC22Q9HCG8 908 aaKnown RBP9.7□□□□□ -0.86
PROM1-206ENST00000505450 TNRQ92752 1358 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 PLA2R1Q13018 1463 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 ERCC6L2Q5T890 1561 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 SYCP2Q9BX26 1530 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 CABP1Q9NZU7 370 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
PROM1-206ENST00000505450 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
PROM1-206ENST00000505450 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
PROM1-206ENST00000505450 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
PROM1-206ENST00000505450 RTF1Q92541 710 aaKnown RBP9.69□□□□□ -0.86
PROM1-206ENST00000505450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.69□□□□□ -0.86
PROM1-206ENST00000505450 ZC3H6P61129 1189 aaKnown RBP9.69□□□□□ -0.86
PROM1-206ENST00000505450 PKP1Q13835 747 aa9.69□□□□□ -0.86
PROM1-206ENST00000505450 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
PROM1-206ENST00000505450 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 PRAM1Q96QH2 718 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
PROM1-206ENST00000505450 ERC2O15083 957 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 FIBPO43427 364 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 CBX1P83916 185 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 ILDR1Q86SU0 546 aaPredicted RBP9.68□□□□□ -0.86
PROM1-206ENST00000505450 NLRP2Q9NX02 1062 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 SHANK2Q9UPX8 1470 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 NPC1L1Q9UHC9 1359 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 STK31Q9BXU1 1019 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 MSH6P52701 1360 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 KDM5DQ9BY66 1539 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
PROM1-206ENST00000505450 ADGBQ8N7X0 1667 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
PROM1-206ENST00000505450 EXOC6BQ9Y2D4 811 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 NLRP6P59044 892 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 OTUD7AQ8TE49 926 aaPredicted RBP9.67□□□□□ -0.86
PROM1-206ENST00000505450 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 ZKSCAN5Q9Y2L8 839 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 MTERF4Q7Z6M4 381 aaKnown RBP9.67□□□□□ -0.86
PROM1-206ENST00000505450 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
PROM1-206ENST00000505450 VPS37CA5D8V6 355 aaPredicted RBP9.66□□□□□ -0.86
PROM1-206ENST00000505450 FCHSD2O94868 740 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 TSC1Q92574 1164 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 PODXL2Q9NZ53 605 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 SDSP20132 328 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 NOS1P29475 1434 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
PROM1-206ENST00000505450 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.86
PROM1-206ENST00000505450 NAP1L2Q9ULW6 460 aaPredicted RBP9.65□□□□□ -0.86
PROM1-206ENST00000505450 MAP4K4O95819 1239 aaPredicted RBP9.65□□□□□ -0.86
PROM1-206ENST00000505450 SLC4A2P04920 1241 aa9.65□□□□□ -0.86
PROM1-206ENST00000505450 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.86
PROM1-206ENST00000505450 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
PROM1-206ENST00000505450 TTC22Q5TAA0 569 aa9.65□□□□□ -0.86
PROM1-206ENST00000505450 LRSAM1Q6UWE0 723 aa9.65□□□□□ -0.86
PROM1-206ENST00000505450 COG3Q96JB2 828 aa9.65□□□□□ -0.86
PROM1-206ENST00000505450 FGD1P98174 961 aa9.65□□□□□ -0.87
PROM1-206ENST00000505450 FKBP5Q13451 457 aaPredicted RBP9.65□□□□□ -0.87
PROM1-206ENST00000505450 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.87
PROM1-206ENST00000505450 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.87
PROM1-206ENST00000505450 EIF2AK4Q9P2K8 1649 aaKnown RBP9.65□□□□□ -0.87
PROM1-206ENST00000505450 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 FYB1O15117 783 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
PROM1-206ENST00000505450 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 C8orf58Q8NAV2 365 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms