RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
CCSER1-205ENST00000505073 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
CCSER1-205ENST00000505073 PEAK1Q9H792 1746 aa17.11■□□□□ 0.33
CCSER1-205ENST00000505073 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
CCSER1-205ENST00000505073 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
CCSER1-205ENST00000505073 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
CCSER1-205ENST00000505073 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
CCSER1-205ENST00000505073 RIPK4P57078 832 aa17.1■□□□□ 0.33
CCSER1-205ENST00000505073 PSME1Q06323 249 aa17.1■□□□□ 0.33
CCSER1-205ENST00000505073 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
CCSER1-205ENST00000505073 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
CCSER1-205ENST00000505073 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
CCSER1-205ENST00000505073 PDE4AP27815 886 aa17.09■□□□□ 0.33
CCSER1-205ENST00000505073 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
CCSER1-205ENST00000505073 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
CCSER1-205ENST00000505073 MS4A1P11836 297 aa17.08■□□□□ 0.33
CCSER1-205ENST00000505073 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.33
CCSER1-205ENST00000505073 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.33
CCSER1-205ENST00000505073 FOXO3O43524 673 aa17.08■□□□□ 0.32
CCSER1-205ENST00000505073 IL27Q8NEV9 243 aa17.08■□□□□ 0.32
CCSER1-205ENST00000505073 NEFMP07197 916 aa17.07■□□□□ 0.32
CCSER1-205ENST00000505073 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
CCSER1-205ENST00000505073 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
CCSER1-205ENST00000505073 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
CCSER1-205ENST00000505073 AMPHP49418 695 aa17.05■□□□□ 0.32
CCSER1-205ENST00000505073 LAS1LQ9Y4W2 734 aaKnown RBP17.05■□□□□ 0.32
CCSER1-205ENST00000505073 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
CCSER1-205ENST00000505073 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
CCSER1-205ENST00000505073 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 BCAR3O75815 825 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
CCSER1-205ENST00000505073 FLT4P35916 1363 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 ATF3P18847 181 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
CCSER1-205ENST00000505073 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
CCSER1-205ENST00000505073 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
CCSER1-205ENST00000505073 USP54Q70EL1 1684 aa17.02■□□□□ 0.31
CCSER1-205ENST00000505073 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
CCSER1-205ENST00000505073 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
CCSER1-205ENST00000505073 MST1RQ04912 1400 aa17■□□□□ 0.31
CCSER1-205ENST00000505073 HOXC9P31274 260 aa17■□□□□ 0.31
CCSER1-205ENST00000505073 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
CCSER1-205ENST00000505073 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
CCSER1-205ENST00000505073 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
CCSER1-205ENST00000505073 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
CCSER1-205ENST00000505073 IL16Q14005 1332 aa16.98■□□□□ 0.31
CCSER1-205ENST00000505073 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
CCSER1-205ENST00000505073 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
CCSER1-205ENST00000505073 ZNF335Q9H4Z2 1342 aaPredicted RBP16.98■□□□□ 0.31
CCSER1-205ENST00000505073 EYA1Q99502 592 aa16.98■□□□□ 0.31
CCSER1-205ENST00000505073 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
CCSER1-205ENST00000505073 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
CCSER1-205ENST00000505073 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
CCSER1-205ENST00000505073 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
CCSER1-205ENST00000505073 DLG5Q8TDM6 1919 aa16.97■□□□□ 0.31
CCSER1-205ENST00000505073 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
CCSER1-205ENST00000505073 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
CCSER1-205ENST00000505073 DCCP43146 1447 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 BCL2L13Q9BXK5 485 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 MSH6P52701 1360 aa16.96■□□□□ 0.31
CCSER1-205ENST00000505073 NFAT5O94916 1531 aa16.96■□□□□ 0.3
CCSER1-205ENST00000505073 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
CCSER1-205ENST00000505073 XIRP1Q702N8 1843 aaKnown RBP16.95■□□□□ 0.3
CCSER1-205ENST00000505073 TRPM3Q9HCF6 1732 aaPredicted RBP16.95■□□□□ 0.3
CCSER1-205ENST00000505073 LTN1O94822 1766 aa16.95■□□□□ 0.3
CCSER1-205ENST00000505073 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
CCSER1-205ENST00000505073 IGSF1Q8N6C5 1336 aa16.94■□□□□ 0.3
CCSER1-205ENST00000505073 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
CCSER1-205ENST00000505073 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
CCSER1-205ENST00000505073 GCP02774 474 aa16.93■□□□□ 0.3
CCSER1-205ENST00000505073 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
CCSER1-205ENST00000505073 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
CCSER1-205ENST00000505073 IP6K1Q92551 441 aa16.93■□□□□ 0.3
CCSER1-205ENST00000505073 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
CCSER1-205ENST00000505073 KDRP35968 1356 aa16.91■□□□□ 0.3
CCSER1-205ENST00000505073 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
CCSER1-205ENST00000505073 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
CCSER1-205ENST00000505073 MTHFSDQ2M296 383 aaKnown RBP16.9■□□□□ 0.3
CCSER1-205ENST00000505073 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
CCSER1-205ENST00000505073 USP19O94966 1318 aa16.9■□□□□ 0.3
CCSER1-205ENST00000505073 SLIT3O75094 1523 aa16.9■□□□□ 0.3
CCSER1-205ENST00000505073 GNAI1P63096 354 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 MCM10Q7L590 875 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 PANK1Q8TE04 598 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
CCSER1-205ENST00000505073 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 MBIPQ9NS73 344 aa16.89■□□□□ 0.29
CCSER1-205ENST00000505073 GSE1Q14687 1217 aa16.88■□□□□ 0.29
CCSER1-205ENST00000505073 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
CCSER1-205ENST00000505073 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
CCSER1-205ENST00000505073 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
CCSER1-205ENST00000505073 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms