RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
SDHA-204ENST00000504309 NOP58Q9Y2X3 529 aaKnown RBP23.1■■□□□ 1.29
SDHA-204ENST00000504309 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
SDHA-204ENST00000504309 NPM2Q86SE8 214 aaKnown RBP23.09■■□□□ 1.29
SDHA-204ENST00000504309 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
SDHA-204ENST00000504309 CHD2O14647 1828 aaKnown RBP23.08■■□□□ 1.29
SDHA-204ENST00000504309 RGS3P49796 1198 aa23.08■■□□□ 1.29
SDHA-204ENST00000504309 AAMPQ13685 434 aa23.07■■□□□ 1.28
SDHA-204ENST00000504309 MARF1Q9Y4F3 1742 aaKnown RBP23.07■■□□□ 1.28
SDHA-204ENST00000504309 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
SDHA-204ENST00000504309 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
SDHA-204ENST00000504309 USP31Q70CQ4 1352 aa23.06■■□□□ 1.28
SDHA-204ENST00000504309 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
SDHA-204ENST00000504309 DZIP1LQ8IYY4 767 aaKnown RBP23.05■■□□□ 1.28
SDHA-204ENST00000504309 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
SDHA-204ENST00000504309 PCDHB15Q9Y5E8 787 aa23.05■■□□□ 1.28
SDHA-204ENST00000504309 TRIM27P14373 513 aa23.05■■□□□ 1.28
SDHA-204ENST00000504309 FTSJ3Q8IY81 847 aaKnown RBP23.05■■□□□ 1.28
SDHA-204ENST00000504309 ADAMTSL3P82987 1691 aa23.04■■□□□ 1.28
SDHA-204ENST00000504309 EIF4A2Q14240 407 aaKnown RBP23.04■■□□□ 1.28
SDHA-204ENST00000504309 KCNA6P17658 529 aa23.03■■□□□ 1.28
SDHA-204ENST00000504309 C8orf34Q49A92 452 aa23.03■■□□□ 1.28
SDHA-204ENST00000504309 LAS1LQ9Y4W2 734 aaKnown RBP23.03■■□□□ 1.28
SDHA-204ENST00000504309 PIK3R4Q99570 1358 aa23.02■■□□□ 1.28
SDHA-204ENST00000504309 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
SDHA-204ENST00000504309 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
SDHA-204ENST00000504309 ATF7IPQ6VMQ6 1270 aa23.01■■□□□ 1.27
SDHA-204ENST00000504309 NOB1Q9ULX3 412 aaKnown RBP23.01■■□□□ 1.27
SDHA-204ENST00000504309 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
SDHA-204ENST00000504309 AEBP1Q8IUX7 1158 aa23.01■■□□□ 1.27
SDHA-204ENST00000504309 USP54Q70EL1 1684 aa23■■□□□ 1.27
SDHA-204ENST00000504309 KIF16BQ96L93 1317 aa23■■□□□ 1.27
SDHA-204ENST00000504309 CALD1Q05682 793 aaKnown RBP23■■□□□ 1.27
SDHA-204ENST00000504309 IFT57Q9NWB7 429 aa22.99■■□□□ 1.27
SDHA-204ENST00000504309 SOX12O15370 315 aa22.99■■□□□ 1.27
SDHA-204ENST00000504309 ALDH1L2Q3SY69 923 aa22.99■■□□□ 1.27
SDHA-204ENST00000504309 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
SDHA-204ENST00000504309 NGDNQ8NEJ9 315 aaKnown RBP22.98■■□□□ 1.27
SDHA-204ENST00000504309 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
SDHA-204ENST00000504309 FAM83GA6ND36 823 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 ZNF853P0CG23 659 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 GNAI1P63096 354 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 SULT6B1Q6IMI4 303 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 MBIPQ9NS73 344 aa22.97■■□□□ 1.27
SDHA-204ENST00000504309 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
SDHA-204ENST00000504309 ITPRIPQ8IWB1 547 aa22.96■■□□□ 1.27
SDHA-204ENST00000504309 MAP3K19Q56UN5 1328 aa22.95■■□□□ 1.26
SDHA-204ENST00000504309 ZNF428Q96B54 188 aa22.95■■□□□ 1.26
SDHA-204ENST00000504309 TSPYL6Q8N831 410 aa22.94■■□□□ 1.26
SDHA-204ENST00000504309 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
SDHA-204ENST00000504309 DCTN1Q14203 1278 aa22.94■■□□□ 1.26
SDHA-204ENST00000504309 TMEM57Q8N5G2 664 aa22.94■■□□□ 1.26
SDHA-204ENST00000504309 VAMP4O75379 141 aa22.93■■□□□ 1.26
SDHA-204ENST00000504309 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
SDHA-204ENST00000504309 SBNO1A3KN83 1393 aa22.93■■□□□ 1.26
SDHA-204ENST00000504309 FLT4P35916 1363 aa22.93■■□□□ 1.26
SDHA-204ENST00000504309 BRPF1P55201 1214 aaPredicted RBP22.93■■□□□ 1.26
SDHA-204ENST00000504309 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
SDHA-204ENST00000504309 RWDD1Q9H446 243 aaPredicted RBP22.92■■□□□ 1.26
SDHA-204ENST00000504309 LTN1O94822 1766 aa22.91■■□□□ 1.26
SDHA-204ENST00000504309 ARHGEF10O15013 1369 aa22.91■■□□□ 1.26
SDHA-204ENST00000504309 ANKLE2Q86XL3 938 aa22.89■■□□□ 1.26
SDHA-204ENST00000504309 PDZRN3Q9UPQ7 1066 aa22.89■■□□□ 1.26
SDHA-204ENST00000504309 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.25
SDHA-204ENST00000504309 MRPL50Q8N5N7 158 aaKnown RBP22.88■■□□□ 1.25
SDHA-204ENST00000504309 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
SDHA-204ENST00000504309 C8orf58Q8NAV2 365 aa22.88■■□□□ 1.25
SDHA-204ENST00000504309 ZBTB40Q9NUA8 1239 aa22.86■■□□□ 1.25
SDHA-204ENST00000504309 KDRP35968 1356 aa22.85■■□□□ 1.25
SDHA-204ENST00000504309 NLRP6P59044 892 aa22.85■■□□□ 1.25
SDHA-204ENST00000504309 HDAC1Q13547 482 aaPredicted RBP22.85■■□□□ 1.25
SDHA-204ENST00000504309 MCM10Q7L590 875 aa22.84■■□□□ 1.25
SDHA-204ENST00000504309 AMPHP49418 695 aa22.83■■□□□ 1.25
SDHA-204ENST00000504309 NUTM2GQ5VZR2 741 aa22.83■■□□□ 1.25
SDHA-204ENST00000504309 RBM33Q96EV2 1170 aaKnown RBP22.83■■□□□ 1.25
SDHA-204ENST00000504309 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.24
SDHA-204ENST00000504309 ADGRL3Q9HAR2 1447 aa22.83■■□□□ 1.24
SDHA-204ENST00000504309 NWD1Q149M9 1564 aa22.83■■□□□ 1.24
SDHA-204ENST00000504309 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
SDHA-204ENST00000504309 DDRGK1Q96HY6 314 aa22.82■■□□□ 1.24
SDHA-204ENST00000504309 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
SDHA-204ENST00000504309 ABCC4O15439 1325 aa22.81■■□□□ 1.24
SDHA-204ENST00000504309 CRB1P82279 1406 aa22.8■■□□□ 1.24
SDHA-204ENST00000504309 EYA1Q99502 592 aa22.8■■□□□ 1.24
SDHA-204ENST00000504309 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
SDHA-204ENST00000504309 ABTB2Q8N961 1025 aa22.8■■□□□ 1.24
SDHA-204ENST00000504309 KIF24Q5T7B8 1368 aa22.79■■□□□ 1.24
SDHA-204ENST00000504309 CHL1O00533 1208 aa22.79■■□□□ 1.24
SDHA-204ENST00000504309 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
SDHA-204ENST00000504309 FOXO3O43524 673 aa22.78■■□□□ 1.24
SDHA-204ENST00000504309 MTHFSDQ2M296 383 aaKnown RBP22.78■■□□□ 1.24
SDHA-204ENST00000504309 KRT24Q2M2I5 525 aa22.78■■□□□ 1.24
SDHA-204ENST00000504309 HOXC9P31274 260 aa22.78■■□□□ 1.24
SDHA-204ENST00000504309 SMC5Q8IY18 1101 aa22.78■■□□□ 1.24
SDHA-204ENST00000504309 NFAT5O94916 1531 aa22.77■■□□□ 1.24
SDHA-204ENST00000504309 SEC24BO95487 1268 aa22.77■■□□□ 1.23
SDHA-204ENST00000504309 USP19O94966 1318 aa22.76■■□□□ 1.23
SDHA-204ENST00000504309 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
SDHA-204ENST00000504309 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms