RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
COL1A1-210ENST00000504289 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
COL1A1-210ENST00000504289 FLT4P35916 1363 aa12.6□□□□□ -0.39
COL1A1-210ENST00000504289 IPO8O15397 1037 aaKnown RBP12.6□□□□□ -0.39
COL1A1-210ENST00000504289 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
COL1A1-210ENST00000504289 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
COL1A1-210ENST00000504289 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
COL1A1-210ENST00000504289 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
COL1A1-210ENST00000504289 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
COL1A1-210ENST00000504289 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
COL1A1-210ENST00000504289 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
COL1A1-210ENST00000504289 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
COL1A1-210ENST00000504289 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
COL1A1-210ENST00000504289 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
COL1A1-210ENST00000504289 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
COL1A1-210ENST00000504289 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 PHACTR3Q96KR7 559 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
COL1A1-210ENST00000504289 KDRP35968 1356 aa12.56□□□□□ -0.4
COL1A1-210ENST00000504289 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
COL1A1-210ENST00000504289 PIK3C2AO00443 1686 aa12.56□□□□□ -0.4
COL1A1-210ENST00000504289 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
COL1A1-210ENST00000504289 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
COL1A1-210ENST00000504289 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
COL1A1-210ENST00000504289 HMOX1P09601 288 aa12.55□□□□□ -0.4
COL1A1-210ENST00000504289 FBLN1P23142 703 aa12.55□□□□□ -0.4
COL1A1-210ENST00000504289 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
COL1A1-210ENST00000504289 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-210ENST00000504289 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
COL1A1-210ENST00000504289 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
COL1A1-210ENST00000504289 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 NLRP6P59044 892 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
COL1A1-210ENST00000504289 HSPA2P54652 639 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 SULT6B1Q6IMI4 303 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
COL1A1-210ENST00000504289 KCNH5Q8NCM2 988 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
COL1A1-210ENST00000504289 PDE4AP27815 886 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 AMPHP49418 695 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 HSP90AB2PQ58FF8 381 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-210ENST00000504289 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 MST1RQ04912 1400 aa12.52□□□□□ -0.41
COL1A1-210ENST00000504289 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
COL1A1-210ENST00000504289 VAMP4O75379 141 aa12.51□□□□□ -0.41
COL1A1-210ENST00000504289 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
COL1A1-210ENST00000504289 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
COL1A1-210ENST00000504289 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-210ENST00000504289 DCCP43146 1447 aa12.51□□□□□ -0.41
COL1A1-210ENST00000504289 CHL1O00533 1208 aa12.5□□□□□ -0.41
COL1A1-210ENST00000504289 RLBP1P12271 317 aa12.5□□□□□ -0.41
COL1A1-210ENST00000504289 TRIM27P14373 513 aa12.5□□□□□ -0.41
COL1A1-210ENST00000504289 ANP32AP39687 249 aaKnown RBP12.5□□□□□ -0.41
COL1A1-210ENST00000504289 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
COL1A1-210ENST00000504289 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
COL1A1-210ENST00000504289 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
COL1A1-210ENST00000504289 HOXC9P31274 260 aa12.49□□□□□ -0.41
COL1A1-210ENST00000504289 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-210ENST00000504289 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
COL1A1-210ENST00000504289 PSME1Q06323 249 aa12.48□□□□□ -0.41
COL1A1-210ENST00000504289 IP6K1Q92551 441 aa12.48□□□□□ -0.41
COL1A1-210ENST00000504289 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
COL1A1-210ENST00000504289 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
COL1A1-210ENST00000504289 TWISTNBQ3B726 338 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-210ENST00000504289 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
COL1A1-210ENST00000504289 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 EYA1Q99502 592 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 NFAT5O94916 1531 aa12.47□□□□□ -0.41
COL1A1-210ENST00000504289 IGHDP01880 384 aa12.46□□□□□ -0.41
COL1A1-210ENST00000504289 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
COL1A1-210ENST00000504289 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-210ENST00000504289 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
COL1A1-210ENST00000504289 CHMP4AQ9BY43 222 aa12.46□□□□□ -0.41
COL1A1-210ENST00000504289 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.41
COL1A1-210ENST00000504289 STRCQ7RTU9 1775 aa12.46□□□□□ -0.42
COL1A1-210ENST00000504289 CRB1P82279 1406 aa12.45□□□□□ -0.42
COL1A1-210ENST00000504289 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-210ENST00000504289 C14orf37Q86TY3 774 aa12.45□□□□□ -0.42
COL1A1-210ENST00000504289 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
COL1A1-210ENST00000504289 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
COL1A1-210ENST00000504289 SLIT3O75094 1523 aa12.45□□□□□ -0.42
COL1A1-210ENST00000504289 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
COL1A1-210ENST00000504289 ABCC4O15439 1325 aa12.44□□□□□ -0.42
COL1A1-210ENST00000504289 USP19O94966 1318 aa12.44□□□□□ -0.42
COL1A1-210ENST00000504289 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms