RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MTERF4Q7Z6M4 381 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 RBM33Q96EV2 1170 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 FSD1Q9BTV5 496 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 PRDM11Q9NQV5 511 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 HIP1O00291 1037 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 CCDC173Q0VFZ6 552 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 C1orf115Q9H7X2 142 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 R3HCC1Q9Y3T6 440 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 MAP7D2Q96T17 732 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 BRPF3Q9ULD4 1205 aa19.38■□□□□ 0.69
HMGXB3-202ENST00000503427 FBXO31Q5XUX0 539 aaPredicted RBP19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 SRCIN1Q9C0H9 1055 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 PCMTD1Q96MG8 357 aaPredicted RBP19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 TRIM34Q9BYJ4 488 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 KDM5BQ9UGL1 1544 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 NOS1P29475 1434 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
HMGXB3-202ENST00000503427 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
HMGXB3-202ENST00000503427 TSPY26PQ9H489 355 aa19.36■□□□□ 0.69
HMGXB3-202ENST00000503427 ARGLU1Q9NWB6 273 aaPredicted RBP19.36■□□□□ 0.69
HMGXB3-202ENST00000503427 ABCC11Q96J66 1382 aa19.36■□□□□ 0.69
HMGXB3-202ENST00000503427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 WASHC4Q2M389 1173 aa19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 WASLO00401 505 aaPredicted RBP19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
HMGXB3-202ENST00000503427 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 FOSBP53539 338 aa19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 PDE4CQ08493 712 aa19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 MNS1Q8NEH6 495 aa19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 NSD2O96028 1365 aa19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 SETQ01105 290 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-202ENST00000503427 FBXW7Q969H0 707 aa19.33■□□□□ 0.69
HMGXB3-202ENST00000503427 CHD1LQ86WJ1 897 aa19.33■□□□□ 0.68
HMGXB3-202ENST00000503427 CIZ1Q9ULV3 898 aaPredicted RBP19.33■□□□□ 0.68
HMGXB3-202ENST00000503427 ASXL2Q76L83 1435 aa19.33■□□□□ 0.68
HMGXB3-202ENST00000503427 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
HMGXB3-202ENST00000503427 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
HMGXB3-202ENST00000503427 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
HMGXB3-202ENST00000503427 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
HMGXB3-202ENST00000503427 TBC1D2BQ9UPU7 963 aa19.32■□□□□ 0.68
HMGXB3-202ENST00000503427 TRIM5Q9C035 493 aa19.31■□□□□ 0.68
HMGXB3-202ENST00000503427 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
HMGXB3-202ENST00000503427 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
HMGXB3-202ENST00000503427 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-202ENST00000503427 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
HMGXB3-202ENST00000503427 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
HMGXB3-202ENST00000503427 KINO60870 393 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-202ENST00000503427 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
HMGXB3-202ENST00000503427 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
HMGXB3-202ENST00000503427 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
HMGXB3-202ENST00000503427 HMGN5P82970 282 aaKnown RBP19.29■□□□□ 0.68
HMGXB3-202ENST00000503427 PHF8Q9UPP1 1060 aa19.29■□□□□ 0.68
HMGXB3-202ENST00000503427 WDR33Q9C0J8 1336 aaKnown RBP19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 DHX16O60231 1041 aaKnown RBP19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 XBP1P17861 261 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 NME9Q86XW9 330 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 RPAP2Q8IXW5 612 aaPredicted RBP19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 FIBPO43427 364 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 GRPEL1Q9HAV7 217 aa19.28■□□□□ 0.68
HMGXB3-202ENST00000503427 A2MP01023 1474 aa19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 MCM4P33991 863 aa19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 ACBD3Q9H3P7 528 aa19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 BRMS1Q9HCU9 246 aa19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 ZC3H6P61129 1189 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 XPCQ01831 940 aaPredicted RBP19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
HMGXB3-202ENST00000503427 TCOF1Q13428 1488 aaKnown RBP19.27■□□□□ 0.67
HMGXB3-202ENST00000503427 SYCP2Q9BX26 1530 aa19.27■□□□□ 0.67
HMGXB3-202ENST00000503427 CYP46A1Q9Y6A2 500 aa19.26■□□□□ 0.67
HMGXB3-202ENST00000503427 IL27Q8NEV9 243 aa19.26■□□□□ 0.67
HMGXB3-202ENST00000503427 ZNF396Q96N95 335 aaPredicted RBP19.26■□□□□ 0.67
HMGXB3-202ENST00000503427 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 CCDC158Q5M9N0 1113 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 NUP160Q12769 1436 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 ANKRD1Q15327 319 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 AMOTQ4VCS5 1084 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 WDR62O43379 1518 aa19.25■□□□□ 0.67
HMGXB3-202ENST00000503427 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 TNRQ92752 1358 aa19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 CNNM1Q9NRU3 951 aa19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 RAD21O60216 631 aa19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
HMGXB3-202ENST00000503427 RALGAPBQ86X10 1494 aa19.23■□□□□ 0.67
HMGXB3-202ENST00000503427 FAM177BA6PVY3 158 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms