RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 PMFBP1Q8TBY8 1022 aa15.23■□□□□ 0.03
CDK11A-222ENST00000498810 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
CDK11A-222ENST00000498810 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
CDK11A-222ENST00000498810 WASLO00401 505 aaPredicted RBP15.22■□□□□ 0.03
CDK11A-222ENST00000498810 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
CDK11A-222ENST00000498810 POTEAQ6S8J7 498 aa15.22■□□□□ 0.03
CDK11A-222ENST00000498810 KRT28Q7Z3Y7 464 aa15.22■□□□□ 0.03
CDK11A-222ENST00000498810 ABCA3Q99758 1704 aa15.22■□□□□ 0.03
CDK11A-222ENST00000498810 TOPAZ1Q8N9V7 1692 aa15.22■□□□□ 0.03
CDK11A-222ENST00000498810 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
CDK11A-222ENST00000498810 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
CDK11A-222ENST00000498810 NGLY1Q96IV0 654 aa15.21■□□□□ 0.03
CDK11A-222ENST00000498810 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.03
CDK11A-222ENST00000498810 SOX12O15370 315 aa15.2■□□□□ 0.02
CDK11A-222ENST00000498810 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
CDK11A-222ENST00000498810 ATP7BP35670 1465 aa15.2■□□□□ 0.02
CDK11A-222ENST00000498810 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
CDK11A-222ENST00000498810 LCE2DQ5TA82 110 aaPredicted RBP15.19■□□□□ 0.02
CDK11A-222ENST00000498810 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
CDK11A-222ENST00000498810 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
CDK11A-222ENST00000498810 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
CDK11A-222ENST00000498810 ALS2Q96Q42 1657 aa15.17■□□□□ 0.02
CDK11A-222ENST00000498810 SBNO1A3KN83 1393 aa15.17■□□□□ 0.02
CDK11A-222ENST00000498810 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
CDK11A-222ENST00000498810 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
CDK11A-222ENST00000498810 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
CDK11A-222ENST00000498810 RXRBP28702 533 aa15.16■□□□□ 0.02
CDK11A-222ENST00000498810 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
CDK11A-222ENST00000498810 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
CDK11A-222ENST00000498810 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.15■□□□□ 0.02
CDK11A-222ENST00000498810 USP21Q9UK80 565 aa15.15■□□□□ 0.02
CDK11A-222ENST00000498810 BOLA1Q9Y3E2 137 aa15.15■□□□□ 0.02
CDK11A-222ENST00000498810 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
CDK11A-222ENST00000498810 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
CDK11A-222ENST00000498810 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
CDK11A-222ENST00000498810 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
CDK11A-222ENST00000498810 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
CDK11A-222ENST00000498810 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
CDK11A-222ENST00000498810 STK25O00506 426 aa15.12■□□□□ 0.01
CDK11A-222ENST00000498810 MS4A4AQ96JQ5 239 aa15.12■□□□□ 0.01
CDK11A-222ENST00000498810 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
CDK11A-222ENST00000498810 QTRT2Q9H974 415 aaKnown RBP15.12■□□□□ 0.01
CDK11A-222ENST00000498810 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
CDK11A-222ENST00000498810 PHRF1Q9P1Y6 1649 aaKnown RBP15.11■□□□□ 0.01
CDK11A-222ENST00000498810 TMEM121BQ9BXQ6 578 aaPredicted RBP15.11■□□□□ 0.01
CDK11A-222ENST00000498810 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
CDK11A-222ENST00000498810 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
CDK11A-222ENST00000498810 CRYBG1Q9Y4K1 1723 aa15.1■□□□□ 0.01
CDK11A-222ENST00000498810 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
CDK11A-222ENST00000498810 COL14A1Q05707 1796 aaKnown RBP15.09■□□□□ 0.01
CDK11A-222ENST00000498810 POTEMA6NI47 508 aa15.09■□□□□ 0.01
CDK11A-222ENST00000498810 RBM6P78332 1123 aaKnown RBP15.09■□□□□ 0.01
CDK11A-222ENST00000498810 NBPF8Q3BBV2 869 aa15.09■□□□□ 0.01
CDK11A-222ENST00000498810 ACEP12821 1306 aa15.09■□□□□ 0.01
CDK11A-222ENST00000498810 POTEGQ6S5H5 508 aa15.08■□□□□ 0
CDK11A-222ENST00000498810 RGS12O14924 1447 aa15.08■□□□□ 0
CDK11A-222ENST00000498810 AKAP12Q02952 1782 aa15.07■□□□□ 0
CDK11A-222ENST00000498810 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CDK11A-222ENST00000498810 G3V3G9 751 aa15.06■□□□□ 0
CDK11A-222ENST00000498810 FNBP4Q8N3X1 1017 aaPredicted RBP15.06■□□□□ 0
CDK11A-222ENST00000498810 FBXO22Q8NEZ5 403 aa15.06■□□□□ 0
CDK11A-222ENST00000498810 POLR3AO14802 1390 aaPredicted RBP15.06■□□□□ 0
CDK11A-222ENST00000498810 ATRNO75882 1429 aa15.06■□□□□ 0
CDK11A-222ENST00000498810 ATAD2Q6PL18 1390 aa15.05■□□□□ -0
CDK11A-222ENST00000498810 NRAPQ86VF7 1730 aa15.04■□□□□ -0
CDK11A-222ENST00000498810 SLIT2O94813 1529 aa15.04■□□□□ -0
CDK11A-222ENST00000498810 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
CDK11A-222ENST00000498810 NLRP6P59044 892 aa15.04■□□□□ -0
CDK11A-222ENST00000498810 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
CDK11A-222ENST00000498810 A0A0G2JS52 829 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 MYT1Q01538 1121 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 UNC5CLQ8IV45 518 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 ABTB2Q8N961 1025 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
CDK11A-222ENST00000498810 MFRPQ9BY79 579 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 PRDM11Q9NQV5 511 aa15.03■□□□□ -0
CDK11A-222ENST00000498810 NRKQ7Z2Y5 1582 aa15.02■□□□□ -0
CDK11A-222ENST00000498810 CABP1Q9NZU7 370 aa15.02■□□□□ -0
CDK11A-222ENST00000498810 MON2Q7Z3U7 1717 aa15.02□□□□□ -0.01
CDK11A-222ENST00000498810 USP6P35125 1406 aa15.01□□□□□ -0.01
CDK11A-222ENST00000498810 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
CDK11A-222ENST00000498810 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
CDK11A-222ENST00000498810 SNPHO15079 494 aa15.01□□□□□ -0.01
CDK11A-222ENST00000498810 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
CDK11A-222ENST00000498810 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
CDK11A-222ENST00000498810 GLI3P10071 1580 aa15□□□□□ -0.01
CDK11A-222ENST00000498810 ST18O60284 1047 aa15□□□□□ -0.01
CDK11A-222ENST00000498810 GJD4Q96KN9 370 aaPredicted RBP15□□□□□ -0.01
CDK11A-222ENST00000498810 PIK3C2AO00443 1686 aa15□□□□□ -0.01
CDK11A-222ENST00000498810 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
CDK11A-222ENST00000498810 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
CDK11A-222ENST00000498810 NLRP13Q86W25 1043 aa14.99□□□□□ -0.01
CDK11A-222ENST00000498810 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
CDK11A-222ENST00000498810 BTG4Q9NY30 223 aa14.99□□□□□ -0.01
CDK11A-222ENST00000498810 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
CDK11A-222ENST00000498810 KIAA0232Q92628 1395 aa14.98□□□□□ -0.01
CDK11A-222ENST00000498810 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
CDK11A-222ENST00000498810 ZC3H6P61129 1189 aaKnown RBP14.97□□□□□ -0.01
CDK11A-222ENST00000498810 USP47Q96K76 1375 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms