RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TRMT2AQ8IZ69 625 aaKnown RBP10.02□□□□□ -0.8
HLA-DMB-262ENST00000498020 IL16Q14005 1332 aa10.02□□□□□ -0.8
HLA-DMB-262ENST00000498020 CHRNA2Q15822 529 aa10.02□□□□□ -0.81
HLA-DMB-262ENST00000498020 DIP2CQ9Y2E4 1556 aa10.02□□□□□ -0.81
HLA-DMB-262ENST00000498020 MROH1Q8NDA8 1641 aa10.02□□□□□ -0.81
HLA-DMB-262ENST00000498020 NFE2L2Q16236 605 aa10.02□□□□□ -0.81
HLA-DMB-262ENST00000498020 NME9Q86XW9 330 aa10.01□□□□□ -0.81
HLA-DMB-262ENST00000498020 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
HLA-DMB-262ENST00000498020 ELL2O00472 640 aaPredicted RBP10.01□□□□□ -0.81
HLA-DMB-262ENST00000498020 GLIPR1L2Q4G1C9 344 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 ATF7IPQ6VMQ6 1270 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 API5Q9BZZ5 524 aaKnown RBP10□□□□□ -0.81
HLA-DMB-262ENST00000498020 NBPF14Q5TI25 921 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 GRM1Q13255 1194 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 FRMPD1Q5SYB0 1578 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 SIRT1Q96EB6 747 aa10□□□□□ -0.81
HLA-DMB-262ENST00000498020 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 LRRC59Q96AG4 307 aaKnown RBP9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 PHF8Q9UPP1 1060 aa9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 EMILIN1Q9Y6C2 1016 aa9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 CAMSAP1Q5T5Y3 1602 aa9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 RRS1Q15050 365 aaKnown RBP9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 POLKQ9UBT6 870 aa9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 EIF2S2P20042 333 aaKnown RBP9.99□□□□□ -0.81
HLA-DMB-262ENST00000498020 NOB1Q9ULX3 412 aaKnown RBP9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 PPIP5K1Q6PFW1 1433 aa9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 CASC1Q6TDU7 716 aa9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 ALDH1L2Q3SY69 923 aa9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 SSH1Q8WYL5 1049 aa9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
HLA-DMB-262ENST00000498020 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 STK31Q9BXU1 1019 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 CHMP4AQ9BY43 222 aa9.97□□□□□ -0.81
HLA-DMB-262ENST00000498020 TWISTNBQ3B726 338 aaPredicted RBP9.96□□□□□ -0.81
HLA-DMB-262ENST00000498020 CERKQ8TCT0 537 aa9.96□□□□□ -0.81
HLA-DMB-262ENST00000498020 C19orf44Q9H6X5 657 aa9.96□□□□□ -0.81
HLA-DMB-262ENST00000498020 IFT57Q9NWB7 429 aa9.96□□□□□ -0.81
HLA-DMB-262ENST00000498020 NEXMIFQ5QGS0 1516 aa9.96□□□□□ -0.82
HLA-DMB-262ENST00000498020 ADGRB1O14514 1584 aa9.96□□□□□ -0.82
HLA-DMB-262ENST00000498020 EXOC5O00471 708 aa9.96□□□□□ -0.82
HLA-DMB-262ENST00000498020 TATP17735 454 aaPredicted RBP9.96□□□□□ -0.82
HLA-DMB-262ENST00000498020 EDC4Q6P2E9 1401 aaKnown RBP9.96□□□□□ -0.82
HLA-DMB-262ENST00000498020 TRIM44Q96DX7 344 aaPredicted RBP9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 ZC3H13Q5T200 1668 aaKnown RBP9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 ACEP12821 1306 aa9.95□□□□□ -0.82
HLA-DMB-262ENST00000498020 AGLP35573 1532 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 A2ML1A8K2U0 1454 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 FBLN1P23142 703 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 IGHDP01880 384 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 TRIM27P14373 513 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 HMMRO75330 724 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 DEKP35659 375 aaKnown RBP9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 USP21Q9UK80 565 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 TBX22Q9Y458 520 aa9.94□□□□□ -0.82
HLA-DMB-262ENST00000498020 KCNA6P17658 529 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 ANKRD45Q5TZF3 282 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 QRICH2Q9H0J4 1663 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 TMEM57Q8N5G2 664 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 THUMPD2Q9BTF0 503 aaKnown RBP9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 RSPH6AQ9H0K4 717 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 APBB1O00213 710 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 RXRBP28702 533 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
HLA-DMB-262ENST00000498020 PTCD1O75127 700 aaKnown RBP9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 SLC4A10Q6U841 1118 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 HSCBQ8IWL3 235 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 DDX17Q92841 729 aaKnown RBP9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 ACSBG1Q96GR2 724 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 ATP7BP35670 1465 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 BAG6P46379 1132 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 QTRT2Q9H974 415 aaKnown RBP9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 TTC21AQ8NDW8 1320 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 METP08581 1390 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 NPHP3Q7Z494 1330 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 ALKQ9UM73 1620 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 PHF14O94880 888 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
HLA-DMB-262ENST00000498020 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 RLBP1P12271 317 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 FAM135BQ49AJ0 1406 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms