RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 COG6Q9Y2V7 657 aa4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 ADAMTS19Q8TE59 1207 aa4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 ARID3CA6NKF2 412 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PRR20EP86478 221 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PRR20CP86479 221 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PRR20DP86480 221 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PRR20BP86481 221 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PRR20AP86496 221 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 GMPR2Q9P2T1 348 aaKnown RBP4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 WDR4P57081 412 aaKnown RBP4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 C6orf118Q5T5N4 469 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 AGBL1Q96MI9 1066 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 PCDHB9Q9Y5E1 797 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 WASF2Q9Y6W5 498 aa4.56□□□□□ -1.68
SNRNP48-202ENST00000496946 NRG2O14511 850 aaPredicted RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 GIGYF1O75420 1035 aaPredicted RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 ADH1CP00326 375 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 VEGFBP49765 207 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 TMEM259Q4ZIN3 620 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 NBPF14Q5TI25 921 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 SNIP1Q8TAD8 396 aaKnown RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 INTS6LQ5JSJ4 861 aaKnown RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 DEPDC4Q8N2C3 294 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 SLC10A4Q96EP9 437 aa4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 KCTD15Q96SI1 283 aaPredicted RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 CDCA7Q9BWT1 371 aaPredicted RBP4.55□□□□□ -1.68
SNRNP48-202ENST00000496946 LGR5O75473 907 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 ZIC2O95409 532 aaPredicted RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 SNRPBP14678 240 aaKnown RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 FGD1P98174 961 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 ZNF784Q8NCA9 323 aaPredicted RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 KLF16Q9BXK1 252 aaPredicted RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 ZNF395Q9H8N7 513 aaPredicted RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 CYLDQ9NQC7 956 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 AXIN1O15169 862 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 TIMP2P16035 220 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 PPP1R26Q5T8A7 1209 aaPredicted RBP4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 RAB6BQ9NRW1 208 aa4.54□□□□□ -1.68
SNRNP48-202ENST00000496946 ZBBXA8MT70 800 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 VARSP26640 1264 aaKnown RBP4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 ADD1P35611 737 aaKnown RBP4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 ZFP42Q96MM3 310 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 PURBQ96QR8 312 aaKnown RBP4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 NDUFB9Q9Y6M9 179 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 ERVH48-1M5A8F1 160 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 CAPN5O15484 640 aaPredicted RBP4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 PDXDC2PQ6P474 469 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 TRIM46Q7Z4K8 759 aa4.53□□□□□ -1.68
SNRNP48-202ENST00000496946 RELBQ01201 579 aa4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 GAS2L2Q8NHY3 880 aa4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 SHROOM4Q9ULL8 1493 aa4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 HSP90B1P14625 803 aaKnown RBP4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 FAM174AQ8TBP5 190 aa4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 C1QTNF2Q9BXJ5 285 aa4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 CCDC9Q9Y3X0 531 aaKnown RBP4.52□□□□□ -1.69
SNRNP48-202ENST00000496946 DZIP3Q86Y13 1208 aaKnown RBP4.51□□□□□ -1.69
SNRNP48-202ENST00000496946 KDF1Q8NAX2 398 aaPredicted RBP4.51□□□□□ -1.69
SNRNP48-202ENST00000496946 ZNF777Q9ULD5 760 aaPredicted RBP4.51□□□□□ -1.69
SNRNP48-202ENST00000496946 CCDC116Q8IYX3 515 aa4.51□□□□□ -1.69
SNRNP48-202ENST00000496946 FIGNL2A6NMB9 653 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 PTK2Q05397 1052 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 CDK15Q96Q40 435 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 UCN2Q96RP3 112 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 ARID3AQ99856 593 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 ATP13A2Q9NQ11 1180 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 IGSF3O75054 1194 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 RGS20O76081 388 aa4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 HMGB1P09429 215 aaKnown RBP4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 CCDC85AQ96PX6 553 aaPredicted RBP4.5□□□□□ -1.69
SNRNP48-202ENST00000496946 ZNF326Q5BKZ1 582 aaKnown RBP4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 INSM2Q96T92 566 aaPredicted RBP4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 C11orf95C9JLR9 678 aaPredicted RBP4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 BANK1Q8NDB2 785 aa4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
SNRNP48-202ENST00000496946 LILRA1O75019 489 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 CTSOP43234 321 aaPredicted RBP4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 NBPF20Q3BBV1 942 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 AVPP01185 164 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 BMP2P12643 396 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 NR1H3Q13133 447 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 OXLD1Q5BKU9 147 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 ARMC2Q8NEN0 867 aa4.48□□□□□ -1.69
SNRNP48-202ENST00000496946 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 LINC00528Q8N1L1 170 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 ARHGEF10LQ9HCE6 1279 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 CEP126Q9P2H0 1117 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 ZNF330Q9Y3S2 320 aaPredicted RBP4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 PCDHB11Q9Y5F2 797 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 HDGFL1Q5TGJ6 251 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 MRPL14Q6P1L8 145 aaKnown RBP4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 TRMT44Q8IYL2 757 aaKnown RBP4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 FNBP4Q8N3X1 1017 aaPredicted RBP4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 GLMNQ92990 594 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 C1orf115Q9H7X2 142 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 DNMT3LQ9UJW3 386 aa4.47□□□□□ -1.69
SNRNP48-202ENST00000496946 RFX1P22670 979 aa4.46□□□□□ -1.69
SNRNP48-202ENST00000496946 ZNF787Q6DD87 383 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms