RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 FOXO3O43524 673 aa15.67■□□□□ 0.1
PDE6B-212ENST00000496514 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
PDE6B-212ENST00000496514 ADGRB2O60241 1585 aa15.67■□□□□ 0.1
PDE6B-212ENST00000496514 EIF4A2Q14240 407 aaKnown RBP15.66■□□□□ 0.1
PDE6B-212ENST00000496514 NGDNQ8NEJ9 315 aaKnown RBP15.66■□□□□ 0.1
PDE6B-212ENST00000496514 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
PDE6B-212ENST00000496514 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
PDE6B-212ENST00000496514 TTC21BQ7Z4L5 1316 aa15.65■□□□□ 0.1
PDE6B-212ENST00000496514 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
PDE6B-212ENST00000496514 LNPKQ9C0E8 428 aa15.65■□□□□ 0.1
PDE6B-212ENST00000496514 EID1Q9Y6B2 187 aa15.65■□□□□ 0.1
PDE6B-212ENST00000496514 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 SLKQ9H2G2 1235 aaPredicted RBP15.64■□□□□ 0.09
PDE6B-212ENST00000496514 SETD1AO15047 1707 aaKnown RBP15.64■□□□□ 0.09
PDE6B-212ENST00000496514 ADAMTS13Q76LX8 1427 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 FAM135BQ49AJ0 1406 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 ATP7BP35670 1465 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 VAMP4O75379 141 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
PDE6B-212ENST00000496514 USP19O94966 1318 aa15.64■□□□□ 0.09
PDE6B-212ENST00000496514 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
PDE6B-212ENST00000496514 DDRGK1Q96HY6 314 aa15.63■□□□□ 0.09
PDE6B-212ENST00000496514 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
PDE6B-212ENST00000496514 MFAP1P55081 439 aaKnown RBP15.62■□□□□ 0.09
PDE6B-212ENST00000496514 DDX19BQ9UMR2 479 aa15.62■□□□□ 0.09
PDE6B-212ENST00000496514 APBB1O00213 710 aa15.62■□□□□ 0.09
PDE6B-212ENST00000496514 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
PDE6B-212ENST00000496514 MED14O60244 1454 aa15.61■□□□□ 0.09
PDE6B-212ENST00000496514 REREQ9P2R6 1566 aa15.61■□□□□ 0.09
PDE6B-212ENST00000496514 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
PDE6B-212ENST00000496514 KCNA6P17658 529 aa15.6■□□□□ 0.09
PDE6B-212ENST00000496514 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
PDE6B-212ENST00000496514 MRPL50Q8N5N7 158 aaKnown RBP15.59■□□□□ 0.09
PDE6B-212ENST00000496514 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
PDE6B-212ENST00000496514 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
PDE6B-212ENST00000496514 IL16Q14005 1332 aa15.59■□□□□ 0.09
PDE6B-212ENST00000496514 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.09
PDE6B-212ENST00000496514 GNAI1P63096 354 aa15.58■□□□□ 0.09
PDE6B-212ENST00000496514 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.09
PDE6B-212ENST00000496514 KIF16BQ96L93 1317 aa15.58■□□□□ 0.09
PDE6B-212ENST00000496514 AMPHP49418 695 aa15.58■□□□□ 0.08
PDE6B-212ENST00000496514 NLRP6P59044 892 aa15.58■□□□□ 0.08
PDE6B-212ENST00000496514 MAP3K19Q56UN5 1328 aa15.58■□□□□ 0.08
PDE6B-212ENST00000496514 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
PDE6B-212ENST00000496514 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.58■□□□□ 0.08
PDE6B-212ENST00000496514 NFKBIBQ15653 356 aa15.57■□□□□ 0.08
PDE6B-212ENST00000496514 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
PDE6B-212ENST00000496514 UBR1Q8IWV7 1749 aa15.56■□□□□ 0.08
PDE6B-212ENST00000496514 CDC42BPGQ6DT37 1551 aa15.56■□□□□ 0.08
PDE6B-212ENST00000496514 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
PDE6B-212ENST00000496514 CT47B1P0C2W7 299 aaPredicted RBP15.56■□□□□ 0.08
PDE6B-212ENST00000496514 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
PDE6B-212ENST00000496514 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
PDE6B-212ENST00000496514 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
PDE6B-212ENST00000496514 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
PDE6B-212ENST00000496514 ZBTB7BO15156 539 aaPredicted RBP15.53■□□□□ 0.08
PDE6B-212ENST00000496514 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
PDE6B-212ENST00000496514 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
PDE6B-212ENST00000496514 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
PDE6B-212ENST00000496514 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
PDE6B-212ENST00000496514 SLC4A10Q6U841 1118 aa15.53■□□□□ 0.08
PDE6B-212ENST00000496514 USP6P35125 1406 aa15.53■□□□□ 0.08
PDE6B-212ENST00000496514 F6X3S4 739 aa15.53■□□□□ 0.08
PDE6B-212ENST00000496514 SIRT2Q8IXJ6 389 aa15.52■□□□□ 0.08
PDE6B-212ENST00000496514 ABTB2Q8N961 1025 aa15.52■□□□□ 0.08
PDE6B-212ENST00000496514 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.07
PDE6B-212ENST00000496514 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.07
PDE6B-212ENST00000496514 THEMISQ8N1K5 641 aaPredicted RBP15.52■□□□□ 0.07
PDE6B-212ENST00000496514 EYA1Q99502 592 aa15.52■□□□□ 0.07
PDE6B-212ENST00000496514 TECPR2O15040 1411 aa15.51■□□□□ 0.07
PDE6B-212ENST00000496514 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
PDE6B-212ENST00000496514 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
PDE6B-212ENST00000496514 HDAC1Q13547 482 aaPredicted RBP15.51■□□□□ 0.07
PDE6B-212ENST00000496514 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
PDE6B-212ENST00000496514 G2E3Q7L622 706 aa15.5■□□□□ 0.07
PDE6B-212ENST00000496514 SETD1BQ9UPS6 1966 aaKnown RBP15.5■□□□□ 0.07
PDE6B-212ENST00000496514 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
PDE6B-212ENST00000496514 LMOD3Q0VAK6 560 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 C16orf71Q8IYS4 520 aaPredicted RBP15.49■□□□□ 0.07
PDE6B-212ENST00000496514 ZNF428Q96B54 188 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 SIRT1Q96EB6 747 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 ARXQ96QS3 562 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 TSPYL4Q9UJ04 414 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 RIMS1Q86UR5 1692 aaKnown RBP15.49■□□□□ 0.07
PDE6B-212ENST00000496514 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
PDE6B-212ENST00000496514 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
PDE6B-212ENST00000496514 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
PDE6B-212ENST00000496514 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
PDE6B-212ENST00000496514 SMARCA5O60264 1052 aaPredicted RBP15.48■□□□□ 0.07
PDE6B-212ENST00000496514 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
PDE6B-212ENST00000496514 TBC1D32Q96NH3 1257 aa15.47■□□□□ 0.07
PDE6B-212ENST00000496514 TBC1D2Q9BYX2 928 aa15.47■□□□□ 0.07
PDE6B-212ENST00000496514 OVOS2A0A0J9YW53 1432 aa15.47■□□□□ 0.07
PDE6B-212ENST00000496514 OVOS2Q6IE36 1432 aa15.47■□□□□ 0.07
PDE6B-212ENST00000496514 OTUD7AQ8TE49 926 aaPredicted RBP15.47■□□□□ 0.07
PDE6B-212ENST00000496514 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
PDE6B-212ENST00000496514 C3P01024 1663 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms