RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ABCC3O15438 1527 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 PRDM15P57071 1507 aaPredicted RBP6.82□□□□□ -1.32
VPS52-222ENST00000495981 CEP152O94986 1710 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 IRF5Q13568 498 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 FAM198AQ9UFP1 575 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
VPS52-222ENST00000495981 MTUS2Q5JR59 1369 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 CCNB3Q8WWL7 1395 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 IQGAP1P46940 1657 aa6.81□□□□□ -1.32
VPS52-222ENST00000495981 TUSC1Q2TAM9 212 aa6.81□□□□□ -1.32
VPS52-222ENST00000495981 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
VPS52-222ENST00000495981 KCTD17Q8N5Z5 321 aa6.81□□□□□ -1.32
VPS52-222ENST00000495981 GDPD2Q9HCC8 539 aa6.81□□□□□ -1.32
VPS52-222ENST00000495981 POM121CA8CG34 1229 aa6.8□□□□□ -1.32
VPS52-222ENST00000495981 SPTLC1O15269 473 aa6.8□□□□□ -1.32
VPS52-222ENST00000495981 MEX3CQ5U5Q3 659 aaKnown RBP6.8□□□□□ -1.32
VPS52-222ENST00000495981 RIC3Q7Z5B4 369 aa6.8□□□□□ -1.32
VPS52-222ENST00000495981 UBR1Q8IWV7 1749 aa6.8□□□□□ -1.32
VPS52-222ENST00000495981 SLAIN2Q9P270 581 aa6.8□□□□□ -1.32
VPS52-222ENST00000495981 AFF2P51816 1311 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 ZNF644Q9H582 1327 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 NUTM2BA6NNL0 878 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 NUTM2EB1AL46 878 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 C3orf80F5H4A9 247 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 CD46P15529 392 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 PRSS12P56730 875 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 NUTM2DQ5VT03 806 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 TXNDC2Q86VQ3 553 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 NUTM2AQ8IVF1 878 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 ADAM33Q9BZ11 813 aa6.79□□□□□ -1.32
VPS52-222ENST00000495981 CDK12Q9NYV4 1490 aaPredicted RBP6.79□□□□□ -1.32
VPS52-222ENST00000495981 UGGT1Q9NYU2 1555 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 KIF3BO15066 747 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 QPCTQ16769 361 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 IFFO2Q5TF58 517 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 RSBN1LQ6PCB5 846 aaPredicted RBP6.78□□□□□ -1.32
VPS52-222ENST00000495981 ZDHHC16Q969W1 377 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 EYA1Q99502 592 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 QTRT2Q9H974 415 aaKnown RBP6.78□□□□□ -1.32
VPS52-222ENST00000495981 TBC1D2BQ9UPU7 963 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 ERVK-7P63135 1459 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 LRRC9Q6ZRR7 1453 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 NLRP1Q9C000 1473 aa6.78□□□□□ -1.32
VPS52-222ENST00000495981 ROBO1Q9Y6N7 1651 aa6.77□□□□□ -1.32
VPS52-222ENST00000495981 SPATA31A6Q5VVP1 1343 aa6.77□□□□□ -1.32
VPS52-222ENST00000495981 VPS8Q8N3P4 1428 aa6.77□□□□□ -1.33
VPS52-222ENST00000495981 GPR37L1O60883 481 aa6.77□□□□□ -1.33
VPS52-222ENST00000495981 KCNA6P17658 529 aa6.77□□□□□ -1.33
VPS52-222ENST00000495981 AEBP1Q8IUX7 1158 aa6.77□□□□□ -1.33
VPS52-222ENST00000495981 XIRP1Q702N8 1843 aaKnown RBP6.77□□□□□ -1.33
VPS52-222ENST00000495981 DHX29Q7Z478 1369 aaKnown RBP6.77□□□□□ -1.33
VPS52-222ENST00000495981 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 RCCD1A6NED2 376 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 MOXD2PA6NHM9 499 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 LILRB3O75022 631 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 RBM6P78332 1123 aaKnown RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 RTL5Q5HYW3 569 aaPredicted RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 RBM46Q8TBY0 533 aaKnown RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 GLMNQ92990 594 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 CFDP1Q9UEE9 299 aaPredicted RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 PCDHB15Q9Y5E8 787 aa6.76□□□□□ -1.33
VPS52-222ENST00000495981 KDM5AP29375 1690 aaKnown RBP6.76□□□□□ -1.33
VPS52-222ENST00000495981 SCAF11Q99590 1463 aaKnown RBP6.75□□□□□ -1.33
VPS52-222ENST00000495981 PPP1R15AO75807 674 aaPredicted RBP6.75□□□□□ -1.33
VPS52-222ENST00000495981 NDUFV2P19404 249 aa6.75□□□□□ -1.33
VPS52-222ENST00000495981 ZNF454Q8N9F8 522 aa6.75□□□□□ -1.33
VPS52-222ENST00000495981 ADAMTS19Q8TE59 1207 aa6.75□□□□□ -1.33
VPS52-222ENST00000495981 ARHGAP23Q9P227 1491 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 COL9A1P20849 921 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 GJA5P36382 358 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 ABL2P42684 1182 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 SRPK2P78362 688 aaKnown RBP6.74□□□□□ -1.33
VPS52-222ENST00000495981 DEFB132Q7Z7B7 95 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 KHSRPQ92945 711 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS52-222ENST00000495981 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
VPS52-222ENST00000495981 PIK3C2BO00750 1634 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 COL16A1Q07092 1604 aaPredicted RBP6.74□□□□□ -1.33
VPS52-222ENST00000495981 PTPN23Q9H3S7 1636 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 SLIT1O75093 1534 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 DUOX2Q9NRD8 1548 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 MYOM3Q5VTT5 1437 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 NWD1Q149M9 1564 aa6.74□□□□□ -1.33
VPS52-222ENST00000495981 EFCAB6Q5THR3 1501 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 SNPHO15079 494 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 CALR3Q96L12 384 aaKnown RBP6.73□□□□□ -1.33
VPS52-222ENST00000495981 C8orf37Q96NL8 207 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 TSKSQ9UJT2 592 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 FGD6Q6ZV73 1430 aa6.73□□□□□ -1.33
VPS52-222ENST00000495981 UTRNP46939 3433 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 LMTK2Q8IWU2 1503 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 NUDT7P0C024 238 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 USP17L8P0C7I0 530 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 ZNF710Q8N1W2 664 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms