RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
PRPF4B-209ENST00000494674 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
PRPF4B-209ENST00000494674 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
PRPF4B-209ENST00000494674 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
PRPF4B-209ENST00000494674 NFAT5O94916 1531 aa13.8□□□□□ -0.2
PRPF4B-209ENST00000494674 FLT4P35916 1363 aa13.8□□□□□ -0.2
PRPF4B-209ENST00000494674 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
PRPF4B-209ENST00000494674 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
PRPF4B-209ENST00000494674 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
PRPF4B-209ENST00000494674 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
PRPF4B-209ENST00000494674 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
PRPF4B-209ENST00000494674 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
PRPF4B-209ENST00000494674 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
PRPF4B-209ENST00000494674 RBM19Q9Y4C8 960 aaKnown RBP13.77□□□□□ -0.21
PRPF4B-209ENST00000494674 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
PRPF4B-209ENST00000494674 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
PRPF4B-209ENST00000494674 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
PRPF4B-209ENST00000494674 SOX12O15370 315 aa13.76□□□□□ -0.21
PRPF4B-209ENST00000494674 NLRP6P59044 892 aa13.76□□□□□ -0.21
PRPF4B-209ENST00000494674 KDRP35968 1356 aa13.76□□□□□ -0.21
PRPF4B-209ENST00000494674 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
PRPF4B-209ENST00000494674 NEFMP07197 916 aa13.75□□□□□ -0.21
PRPF4B-209ENST00000494674 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
PRPF4B-209ENST00000494674 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
PRPF4B-209ENST00000494674 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 SLIT3O75094 1523 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
PRPF4B-209ENST00000494674 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 RLBP1P12271 317 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
PRPF4B-209ENST00000494674 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 HOXC9P31274 260 aa13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 MST1RQ04912 1400 aa13.72□□□□□ -0.21
PRPF4B-209ENST00000494674 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 DCCP43146 1447 aa13.71□□□□□ -0.21
PRPF4B-209ENST00000494674 FAM83GA6ND36 823 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 AMPHP49418 695 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 EYA1Q99502 592 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 GNAI1P63096 354 aa13.7□□□□□ -0.22
PRPF4B-209ENST00000494674 KDM4FA0A1W2PPD8 638 aa13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 HSPA2P54652 639 aa13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 PSME1Q06323 249 aa13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
PRPF4B-209ENST00000494674 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
PRPF4B-209ENST00000494674 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
PRPF4B-209ENST00000494674 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
PRPF4B-209ENST00000494674 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
PRPF4B-209ENST00000494674 CRB1P82279 1406 aa13.68□□□□□ -0.22
PRPF4B-209ENST00000494674 ALDH1L2Q3SY69 923 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 USP19O94966 1318 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 FOXO3O43524 673 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
PRPF4B-209ENST00000494674 VAMP4O75379 141 aa13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 TRIM27P14373 513 aa13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
PRPF4B-209ENST00000494674 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
PRPF4B-209ENST00000494674 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
PRPF4B-209ENST00000494674 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
PRPF4B-209ENST00000494674 IP6K1Q92551 441 aa13.65□□□□□ -0.22
PRPF4B-209ENST00000494674 AAMPQ13685 434 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 CHL1O00533 1208 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 IGHDP01880 384 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 MCM10Q7L590 875 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms