RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 NEFMP07197 916 aa21.48■■□□□ 1.03
ATG4B-225ENST00000494465 RARSP54136 660 aaKnown RBP21.48■■□□□ 1.03
ATG4B-225ENST00000494465 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
ATG4B-225ENST00000494465 ABTB2Q8N961 1025 aa21.47■■□□□ 1.03
ATG4B-225ENST00000494465 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
ATG4B-225ENST00000494465 NUTM2GQ5VZR2 741 aa21.46■■□□□ 1.03
ATG4B-225ENST00000494465 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
ATG4B-225ENST00000494465 HSPA2P54652 639 aa21.46■■□□□ 1.03
ATG4B-225ENST00000494465 PAK3O75914 559 aaPredicted RBP21.45■■□□□ 1.02
ATG4B-225ENST00000494465 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
ATG4B-225ENST00000494465 ORAI2Q96SN7 254 aa21.45■■□□□ 1.02
ATG4B-225ENST00000494465 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
ATG4B-225ENST00000494465 C19orf44Q9H6X5 657 aa21.43■■□□□ 1.02
ATG4B-225ENST00000494465 LMTK3Q96Q04 1460 aa21.43■■□□□ 1.02
ATG4B-225ENST00000494465 LTN1O94822 1766 aa21.42■■□□□ 1.02
ATG4B-225ENST00000494465 ARHGEF10O15013 1369 aa21.42■■□□□ 1.02
ATG4B-225ENST00000494465 CT47B1P0C2W7 299 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-225ENST00000494465 EXOSC9Q06265 439 aaKnown RBP21.42■■□□□ 1.02
ATG4B-225ENST00000494465 PSME1Q06323 249 aa21.42■■□□□ 1.02
ATG4B-225ENST00000494465 C1orf167Q5SNV9 1468 aa21.42■■□□□ 1.02
ATG4B-225ENST00000494465 NFAT5O94916 1531 aa21.41■■□□□ 1.02
ATG4B-225ENST00000494465 TRPM3Q9HCF6 1732 aaPredicted RBP21.41■■□□□ 1.02
ATG4B-225ENST00000494465 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
ATG4B-225ENST00000494465 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
ATG4B-225ENST00000494465 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
ATG4B-225ENST00000494465 AMPHP49418 695 aa21.4■■□□□ 1.02
ATG4B-225ENST00000494465 PDE3AQ14432 1141 aa21.4■■□□□ 1.02
ATG4B-225ENST00000494465 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
ATG4B-225ENST00000494465 KDRP35968 1356 aa21.39■■□□□ 1.01
ATG4B-225ENST00000494465 HOXC9P31274 260 aa21.39■■□□□ 1.01
ATG4B-225ENST00000494465 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
ATG4B-225ENST00000494465 FOXO3O43524 673 aa21.38■■□□□ 1.01
ATG4B-225ENST00000494465 IGSF1Q8N6C5 1336 aa21.38■■□□□ 1.01
ATG4B-225ENST00000494465 BCL2L13Q9BXK5 485 aa21.37■■□□□ 1.01
ATG4B-225ENST00000494465 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
ATG4B-225ENST00000494465 EYA1Q99502 592 aa21.37■■□□□ 1.01
ATG4B-225ENST00000494465 DCCP43146 1447 aa21.37■■□□□ 1.01
ATG4B-225ENST00000494465 MST1RQ04912 1400 aa21.37■■□□□ 1.01
ATG4B-225ENST00000494465 LMOD3Q0VAK6 560 aa21.36■■□□□ 1.01
ATG4B-225ENST00000494465 PHRF1Q9P1Y6 1649 aaKnown RBP21.36■■□□□ 1.01
ATG4B-225ENST00000494465 RTL1A6NKG5 1358 aa21.36■■□□□ 1.01
ATG4B-225ENST00000494465 CALD1Q05682 793 aaKnown RBP21.36■■□□□ 1.01
ATG4B-225ENST00000494465 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
ATG4B-225ENST00000494465 FAM83GA6ND36 823 aa21.35■■□□□ 1.01
ATG4B-225ENST00000494465 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-225ENST00000494465 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
ATG4B-225ENST00000494465 IFT57Q9NWB7 429 aa21.34■■□□□ 1.01
ATG4B-225ENST00000494465 PANK1Q8TE04 598 aa21.34■■□□□ 1.01
ATG4B-225ENST00000494465 SLIT3O75094 1523 aa21.34■■□□□ 1.01
ATG4B-225ENST00000494465 CANXP27824 592 aaKnown RBP21.33■■□□□ 1
ATG4B-225ENST00000494465 TNNQ9UQP3 1299 aa21.33■■□□□ 1
ATG4B-225ENST00000494465 GNAI1P63096 354 aa21.32■■□□□ 1
ATG4B-225ENST00000494465 DCTN1Q14203 1278 aa21.32■■□□□ 1
ATG4B-225ENST00000494465 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
ATG4B-225ENST00000494465 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
ATG4B-225ENST00000494465 ALS2Q96Q42 1657 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 KDM2BQ8NHM5 1336 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 RLBP1P12271 317 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 ATF3P18847 181 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 CFAP44Q96MT7 982 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 MBIPQ9NS73 344 aa21.31■■□□□ 1
ATG4B-225ENST00000494465 KRT28Q7Z3Y7 464 aa21.3■■□□□ 1
ATG4B-225ENST00000494465 KCNH5Q8NCM2 988 aa21.3■■□□□ 1
ATG4B-225ENST00000494465 IP6K1Q92551 441 aa21.3■■□□□ 1
ATG4B-225ENST00000494465 COG6Q9Y2V7 657 aa21.3■■□□□ 1
ATG4B-225ENST00000494465 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
ATG4B-225ENST00000494465 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
ATG4B-225ENST00000494465 USP19O94966 1318 aa21.29■■□□□ 1
ATG4B-225ENST00000494465 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
ATG4B-225ENST00000494465 GCP02774 474 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 VAMP4O75379 141 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
ATG4B-225ENST00000494465 MCM10Q7L590 875 aa21.25■□□□□ 0.99
ATG4B-225ENST00000494465 CADPS2Q86UW7 1296 aa21.25■□□□□ 0.99
ATG4B-225ENST00000494465 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
ATG4B-225ENST00000494465 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-225ENST00000494465 CRB1P82279 1406 aa21.25■□□□□ 0.99
ATG4B-225ENST00000494465 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
ATG4B-225ENST00000494465 CENPQQ7L2Z9 268 aaPredicted RBP21.24■□□□□ 0.99
ATG4B-225ENST00000494465 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
ATG4B-225ENST00000494465 MSH6P52701 1360 aa21.24■□□□□ 0.99
ATG4B-225ENST00000494465 MED1Q15648 1581 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-225ENST00000494465 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-225ENST00000494465 TRIM27P14373 513 aa21.23■□□□□ 0.99
ATG4B-225ENST00000494465 NOB1Q9ULX3 412 aaKnown RBP21.23■□□□□ 0.99
ATG4B-225ENST00000494465 CHL1O00533 1208 aa21.22■□□□□ 0.99
ATG4B-225ENST00000494465 C8orf58Q8NAV2 365 aa21.22■□□□□ 0.99
ATG4B-225ENST00000494465 DDX17Q92841 729 aaKnown RBP21.22■□□□□ 0.99
ATG4B-225ENST00000494465 LRRC37A3O60309 1634 aa21.22■□□□□ 0.99
ATG4B-225ENST00000494465 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
ATG4B-225ENST00000494465 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
ATG4B-225ENST00000494465 GAS2L2Q8NHY3 880 aa21.22■□□□□ 0.99
ATG4B-225ENST00000494465 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
ATG4B-225ENST00000494465 KIF16BQ96L93 1317 aa21.21■□□□□ 0.99
ATG4B-225ENST00000494465 AAMPQ13685 434 aa21.2■□□□□ 0.98
ATG4B-225ENST00000494465 MVPQ14764 893 aaKnown RBP21.2■□□□□ 0.98
ATG4B-225ENST00000494465 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms