RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 COL14A1Q05707 1796 aaKnown RBP12.33□□□□□ -0.44
ITGB1-217ENST00000494395 NINLQ9Y2I6 1382 aa12.32□□□□□ -0.44
ITGB1-217ENST00000494395 ATRNO75882 1429 aa12.31□□□□□ -0.44
ITGB1-217ENST00000494395 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
ITGB1-217ENST00000494395 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
ITGB1-217ENST00000494395 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
ITGB1-217ENST00000494395 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
ITGB1-217ENST00000494395 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
ITGB1-217ENST00000494395 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
ITGB1-217ENST00000494395 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
ITGB1-217ENST00000494395 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
ITGB1-217ENST00000494395 TMF1P82094 1093 aa12.3□□□□□ -0.44
ITGB1-217ENST00000494395 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
ITGB1-217ENST00000494395 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
ITGB1-217ENST00000494395 EDC4Q6P2E9 1401 aaKnown RBP12.29□□□□□ -0.44
ITGB1-217ENST00000494395 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
ITGB1-217ENST00000494395 NUTM2GQ5VZR2 741 aa12.29□□□□□ -0.44
ITGB1-217ENST00000494395 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
ITGB1-217ENST00000494395 USP21Q9UK80 565 aa12.29□□□□□ -0.44
ITGB1-217ENST00000494395 GLI3P10071 1580 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-217ENST00000494395 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
ITGB1-217ENST00000494395 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 CPDO75976 1380 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 COL18A1P39060 1754 aa12.28□□□□□ -0.44
ITGB1-217ENST00000494395 NFAT5O94916 1531 aa12.27□□□□□ -0.44
ITGB1-217ENST00000494395 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
ITGB1-217ENST00000494395 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
ITGB1-217ENST00000494395 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
ITGB1-217ENST00000494395 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-217ENST00000494395 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
ITGB1-217ENST00000494395 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
ITGB1-217ENST00000494395 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
ITGB1-217ENST00000494395 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-217ENST00000494395 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-217ENST00000494395 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
ITGB1-217ENST00000494395 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
ITGB1-217ENST00000494395 GCP02774 474 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 PYGBP11216 843 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 NLRP6P59044 892 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 RGS12O14924 1447 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 CAMTA1Q9Y6Y1 1673 aa12.25□□□□□ -0.45
ITGB1-217ENST00000494395 SOCS7O14512 581 aa12.24□□□□□ -0.45
ITGB1-217ENST00000494395 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
ITGB1-217ENST00000494395 RXRBP28702 533 aa12.24□□□□□ -0.45
ITGB1-217ENST00000494395 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
ITGB1-217ENST00000494395 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
ITGB1-217ENST00000494395 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
ITGB1-217ENST00000494395 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
ITGB1-217ENST00000494395 NME9Q86XW9 330 aa12.23□□□□□ -0.45
ITGB1-217ENST00000494395 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
ITGB1-217ENST00000494395 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
ITGB1-217ENST00000494395 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
ITGB1-217ENST00000494395 ABCC6O95255 1503 aa12.22□□□□□ -0.45
ITGB1-217ENST00000494395 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-217ENST00000494395 CHRNA2Q15822 529 aa12.22□□□□□ -0.45
ITGB1-217ENST00000494395 VPS72Q15906 364 aa12.22□□□□□ -0.45
ITGB1-217ENST00000494395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
ITGB1-217ENST00000494395 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-217ENST00000494395 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
ITGB1-217ENST00000494395 LTN1O94822 1766 aa12.22□□□□□ -0.45
ITGB1-217ENST00000494395 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
ITGB1-217ENST00000494395 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■■■ 30.5
ITGB1-217ENST00000494395 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
ITGB1-217ENST00000494395 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.46
ITGB1-217ENST00000494395 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.46
ITGB1-217ENST00000494395 THSD7AQ9UPZ6 1657 aa12.2□□□□□ -0.46
ITGB1-217ENST00000494395 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
ITGB1-217ENST00000494395 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
ITGB1-217ENST00000494395 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
ITGB1-217ENST00000494395 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
ITGB1-217ENST00000494395 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
ITGB1-217ENST00000494395 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
ITGB1-217ENST00000494395 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
ITGB1-217ENST00000494395 STK25O00506 426 aa12.18□□□□□ -0.46
ITGB1-217ENST00000494395 FYB1O15117 783 aa12.18□□□□□ -0.46
ITGB1-217ENST00000494395 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-217ENST00000494395 WNK3Q9BYP7 1800 aa12.17□□□□□ -0.46
ITGB1-217ENST00000494395 KIF7Q2M1P5 1343 aa12.16□□□□□ -0.46
ITGB1-217ENST00000494395 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
ITGB1-217ENST00000494395 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
ITGB1-217ENST00000494395 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
ITGB1-217ENST00000494395 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
ITGB1-217ENST00000494395 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
ITGB1-217ENST00000494395 CRB1P82279 1406 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-217ENST00000494395 SOX12O15370 315 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-217ENST00000494395 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
ITGB1-217ENST00000494395 COG3Q96JB2 828 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-217ENST00000494395 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 STRN4Q9NRL3 753 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
ITGB1-217ENST00000494395 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms