RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SLFNL1Q499Z3 407 aa4.69□□□□□ -1.66
LMNB1-207ENST00000494185 Q6ZNB5 142 aa4.69□□□□□ -1.66
LMNB1-207ENST00000494185 FOXJ1Q92949 421 aa4.69□□□□□ -1.66
LMNB1-207ENST00000494185 TRAK2O60296 914 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 GPR37L1O60883 481 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 FSHRP23945 695 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 SKOR1P84550 965 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 IRF5Q13568 498 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 CCDC116Q8IYX3 515 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 FNBP4Q8N3X1 1017 aaPredicted RBP4.68□□□□□ -1.66
LMNB1-207ENST00000494185 CDK15Q96Q40 435 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 PKD2L1Q9P0L9 805 aa4.68□□□□□ -1.66
LMNB1-207ENST00000494185 MYCP01106 439 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-207ENST00000494185 FBXO45P0C2W1 286 aa4.67□□□□□ -1.66
LMNB1-207ENST00000494185 KCTD15Q96SI1 283 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-207ENST00000494185 TOR4AQ9NXH8 423 aa4.67□□□□□ -1.66
LMNB1-207ENST00000494185 TLL2Q9Y6L7 1015 aa4.67□□□□□ -1.66
LMNB1-207ENST00000494185 AXIN1O15169 862 aa4.66□□□□□ -1.66
LMNB1-207ENST00000494185 LZTS3O60299 673 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-207ENST00000494185 VAC14Q08AM6 782 aa4.66□□□□□ -1.66
LMNB1-207ENST00000494185 NNTQ13423 1086 aa4.66□□□□□ -1.66
LMNB1-207ENST00000494185 SCARF1Q14162 830 aa4.66□□□□□ -1.66
LMNB1-207ENST00000494185 MYT1Q01538 1121 aa4.65□□□□□ -1.67
LMNB1-207ENST00000494185 MAP7D1Q3KQU3 841 aa4.65□□□□□ -1.67
LMNB1-207ENST00000494185 RNF135Q8IUD6 432 aa4.65□□□□□ -1.67
LMNB1-207ENST00000494185 EMID1Q96A84 441 aaPredicted RBP4.65□□□□□ -1.67
LMNB1-207ENST00000494185 SENP2Q9HC62 589 aa4.65□□□□□ -1.67
LMNB1-207ENST00000494185 RBM19Q9Y4C8 960 aaKnown RBP4.65□□□□□ -1.67
LMNB1-207ENST00000494185 CAPN5O15484 640 aaPredicted RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 SIAH2O43255 324 aa4.64□□□□□ -1.67
LMNB1-207ENST00000494185 AVPP01185 164 aa4.64□□□□□ -1.67
LMNB1-207ENST00000494185 GTF2E1P29083 439 aaPredicted RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 WDR4P57081 412 aaKnown RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 CRIPAKQ8N1N5 446 aa4.64□□□□□ -1.67
LMNB1-207ENST00000494185 NFATC2IPQ8NCF5 419 aa4.64□□□□□ -1.67
LMNB1-207ENST00000494185 KIFC2Q96AC6 838 aa4.64□□□□□ -1.67
LMNB1-207ENST00000494185 CCDC97Q96F63 343 aaPredicted RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 CALR3Q96L12 384 aaKnown RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 ZNF777Q9ULD5 760 aaPredicted RBP4.64□□□□□ -1.67
LMNB1-207ENST00000494185 POM121CA8CG34 1229 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 SUPT5HO00267 1087 aaKnown RBP4.63□□□□□ -1.67
LMNB1-207ENST00000494185 SMCPP49901 116 aaPredicted RBP4.63□□□□□ -1.67
LMNB1-207ENST00000494185 USP4Q13107 963 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 C4orf48Q5BLP8 95 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 CYP2U1Q7Z449 544 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 OCSTAMPQ9BR26 566 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 DOLKQ9UPQ8 538 aa4.63□□□□□ -1.67
LMNB1-207ENST00000494185 ARID3CA6NKF2 412 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 ZIC2O95409 532 aaPredicted RBP4.62□□□□□ -1.67
LMNB1-207ENST00000494185 SMPD1P17405 629 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 RAB15P59190 212 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 EML3Q32P44 896 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 INTS6LQ5JSJ4 861 aaKnown RBP4.62□□□□□ -1.67
LMNB1-207ENST00000494185 TRIM67Q6ZTA4 783 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 TRIM50Q86XT4 487 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 GLMNQ92990 594 aa4.62□□□□□ -1.67
LMNB1-207ENST00000494185 TSEN34Q9BSV6 310 aaKnown RBP4.62□□□□□ -1.67
LMNB1-207ENST00000494185 ESPNB1AK53 854 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 J3QL48 77 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 ATP1A2P50993 1020 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 ESCO1Q5FWF5 840 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 PPP1R26Q5T8A7 1209 aaPredicted RBP4.61□□□□□ -1.67
LMNB1-207ENST00000494185 HDGFL1Q5TGJ6 251 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 CC2D2BQ6DHV5 1058 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 ALG2Q9H553 416 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 CEP126Q9P2H0 1117 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 PCDHB11Q9Y5F2 797 aa4.61□□□□□ -1.67
LMNB1-207ENST00000494185 TRAF7Q6Q0C0 670 aa4.6□□□□□ -1.67
LMNB1-207ENST00000494185 ADAMTS19Q8TE59 1207 aa4.6□□□□□ -1.67
LMNB1-207ENST00000494185 SERPINA10Q9UK55 444 aa4.6□□□□□ -1.67
LMNB1-207ENST00000494185 NOD1Q9Y239 953 aa4.6□□□□□ -1.67
LMNB1-207ENST00000494185 BMP2P12643 396 aa4.59□□□□□ -1.67
LMNB1-207ENST00000494185 GRM5P41594 1212 aa4.59□□□□□ -1.67
LMNB1-207ENST00000494185 ATP5J2-PTCD1G3V325 749 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 ERVH48-1M5A8F1 160 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 GIGYF1O75420 1035 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-207ENST00000494185 ADH1AP07327 375 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 SKIP12755 728 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 TIMP2P16035 220 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 PSME1Q06323 249 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 OXLD1Q5BKU9 147 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 LINC00528Q8N1L1 170 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 MEIOBQ8N635 442 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 NBPF15Q8N660 670 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 PLPP7Q8NBV4 271 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 HPS1Q92902 700 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 NLRP3Q96P20 1036 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 C1orf115Q9H7X2 142 aa4.58□□□□□ -1.68
LMNB1-207ENST00000494185 ATP9BO43861 1147 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 GNRH1P01148 92 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 NR3C2P08235 984 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 ERVK-9P63128 1117 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 MRPL14Q6P1L8 145 aaKnown RBP4.57□□□□□ -1.68
LMNB1-207ENST00000494185 CCDC82Q8N4S0 544 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 ZNF784Q8NCA9 323 aaPredicted RBP4.57□□□□□ -1.68
LMNB1-207ENST00000494185 ITPKCQ96DU7 683 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 CYLDQ9NQC7 956 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 CHMP3Q9Y3E7 222 aa4.57□□□□□ -1.68
LMNB1-207ENST00000494185 USP17L5A8MUK1 530 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 BACH1O14867 736 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms