RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 BCAR3O75815 825 aa13.86□□□□□ -0.19
CLCN6-208ENST00000494028 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
CLCN6-208ENST00000494028 MAP3K19Q56UN5 1328 aa13.86□□□□□ -0.19
CLCN6-208ENST00000494028 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
CLCN6-208ENST00000494028 HMOX1P09601 288 aa13.85□□□□□ -0.19
CLCN6-208ENST00000494028 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
CLCN6-208ENST00000494028 NFE2L2Q16236 605 aa13.85□□□□□ -0.19
CLCN6-208ENST00000494028 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
CLCN6-208ENST00000494028 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
CLCN6-208ENST00000494028 RARSP54136 660 aaKnown RBP13.84□□□□□ -0.19
CLCN6-208ENST00000494028 VIRMAQ69YN4 1812 aaKnown RBP13.84□□□□□ -0.19
CLCN6-208ENST00000494028 DCCP43146 1447 aa13.83□□□□□ -0.2
CLCN6-208ENST00000494028 RIPK4P57078 832 aa13.83□□□□□ -0.2
CLCN6-208ENST00000494028 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
CLCN6-208ENST00000494028 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
CLCN6-208ENST00000494028 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
CLCN6-208ENST00000494028 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
CLCN6-208ENST00000494028 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
CLCN6-208ENST00000494028 KDRP35968 1356 aa13.82□□□□□ -0.2
CLCN6-208ENST00000494028 C1orf167Q5SNV9 1468 aa13.81□□□□□ -0.2
CLCN6-208ENST00000494028 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
CLCN6-208ENST00000494028 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
CLCN6-208ENST00000494028 MST1RQ04912 1400 aa13.81□□□□□ -0.2
CLCN6-208ENST00000494028 NEFMP07197 916 aa13.8□□□□□ -0.2
CLCN6-208ENST00000494028 AEBP1Q8IUX7 1158 aa13.8□□□□□ -0.2
CLCN6-208ENST00000494028 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
CLCN6-208ENST00000494028 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
CLCN6-208ENST00000494028 EXOSC9Q06265 439 aaKnown RBP13.79□□□□□ -0.2
CLCN6-208ENST00000494028 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
CLCN6-208ENST00000494028 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
CLCN6-208ENST00000494028 SOX12O15370 315 aa13.78□□□□□ -0.2
CLCN6-208ENST00000494028 HSP90AB2PQ58FF8 381 aa13.78□□□□□ -0.2
CLCN6-208ENST00000494028 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
CLCN6-208ENST00000494028 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
CLCN6-208ENST00000494028 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-208ENST00000494028 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
CLCN6-208ENST00000494028 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
CLCN6-208ENST00000494028 THUMPD2Q9BTF0 503 aaKnown RBP13.77□□□□□ -0.21
CLCN6-208ENST00000494028 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
CLCN6-208ENST00000494028 NCOA3Q9Y6Q9 1424 aa13.77□□□□□ -0.21
CLCN6-208ENST00000494028 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
CLCN6-208ENST00000494028 NLRP6P59044 892 aa13.76□□□□□ -0.21
CLCN6-208ENST00000494028 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
CLCN6-208ENST00000494028 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
CLCN6-208ENST00000494028 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-208ENST00000494028 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
CLCN6-208ENST00000494028 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
CLCN6-208ENST00000494028 NCAPD2Q15021 1401 aa13.75□□□□□ -0.21
CLCN6-208ENST00000494028 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
CLCN6-208ENST00000494028 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
CLCN6-208ENST00000494028 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
CLCN6-208ENST00000494028 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
CLCN6-208ENST00000494028 USP19O94966 1318 aa13.74□□□□□ -0.21
CLCN6-208ENST00000494028 RLBP1P12271 317 aa13.74□□□□□ -0.21
CLCN6-208ENST00000494028 HOXC9P31274 260 aa13.74□□□□□ -0.21
CLCN6-208ENST00000494028 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-208ENST00000494028 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-208ENST00000494028 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
CLCN6-208ENST00000494028 CRB1P82279 1406 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-208ENST00000494028 AMPHP49418 695 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 SSH1Q8WYL5 1049 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 COG6Q9Y2V7 657 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 ABCC6O95255 1503 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 COL18A1P39060 1754 aa13.73□□□□□ -0.21
CLCN6-208ENST00000494028 MSH6P52701 1360 aa13.72□□□□□ -0.21
CLCN6-208ENST00000494028 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
CLCN6-208ENST00000494028 GNAI1P63096 354 aa13.72□□□□□ -0.21
CLCN6-208ENST00000494028 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-208ENST00000494028 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
CLCN6-208ENST00000494028 PXDNQ92626 1479 aa13.72□□□□□ -0.21
CLCN6-208ENST00000494028 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
CLCN6-208ENST00000494028 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-208ENST00000494028 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
CLCN6-208ENST00000494028 CLUAP1Q96AJ1 413 aa13.71□□□□□ -0.21
CLCN6-208ENST00000494028 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
CLCN6-208ENST00000494028 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
CLCN6-208ENST00000494028 ADAMTS7Q9UKP4 1686 aa13.7□□□□□ -0.22
CLCN6-208ENST00000494028 TCERG1O14776 1098 aaKnown RBP13.7□□□□□ -0.22
CLCN6-208ENST00000494028 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
CLCN6-208ENST00000494028 EYA1Q99502 592 aa13.7□□□□□ -0.22
CLCN6-208ENST00000494028 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
CLCN6-208ENST00000494028 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
CLCN6-208ENST00000494028 MVPQ14764 893 aaKnown RBP13.69□□□□□ -0.22
CLCN6-208ENST00000494028 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
CLCN6-208ENST00000494028 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
CLCN6-208ENST00000494028 TNS3Q68CZ2 1445 aa13.68□□□□□ -0.22
CLCN6-208ENST00000494028 TRIM27P14373 513 aa13.68□□□□□ -0.22
CLCN6-208ENST00000494028 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-208ENST00000494028 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
CLCN6-208ENST00000494028 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
CLCN6-208ENST00000494028 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
CLCN6-208ENST00000494028 MS4A1P11836 297 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 PSME1Q06323 249 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 AAMPQ13685 434 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms