RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 TTC21BQ7Z4L5 1316 aa8.81□□□□□ -1
FNDC3B-212ENST00000494000 SSH2Q76I76 1423 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
FNDC3B-212ENST00000494000 NGDNQ8NEJ9 315 aaKnown RBP8.8□□□□□ -1
FNDC3B-212ENST00000494000 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 USP31Q70CQ4 1352 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 KIF1AQ12756 1690 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 DEKP35659 375 aaKnown RBP8.8□□□□□ -1
FNDC3B-212ENST00000494000 ZMYND15Q9H091 742 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 KCNG1Q9UIX4 513 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 ADAMTS8Q9UP79 889 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 SHPRHQ149N8 1683 aa8.8□□□□□ -1
FNDC3B-212ENST00000494000 PPP4R3CPQ6ZMV5 832 aa8.79□□□□□ -1
FNDC3B-212ENST00000494000 FAM43BQ6ZT52 329 aaPredicted RBP8.79□□□□□ -1
FNDC3B-212ENST00000494000 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
FNDC3B-212ENST00000494000 C19orf44Q9H6X5 657 aa8.79□□□□□ -1
FNDC3B-212ENST00000494000 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
FNDC3B-212ENST00000494000 KIF24Q5T7B8 1368 aa8.78□□□□□ -1
FNDC3B-212ENST00000494000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.78□□□□□ -1
FNDC3B-212ENST00000494000 PHF8Q9UPP1 1060 aa8.78□□□□□ -1
FNDC3B-212ENST00000494000 RGPD8O14715 1765 aaPredicted RBP8.78□□□□□ -1
FNDC3B-212ENST00000494000 OVOS2A0A0J9YW53 1432 aa8.78□□□□□ -1
FNDC3B-212ENST00000494000 OVOS2Q6IE36 1432 aa8.78□□□□□ -1
FNDC3B-212ENST00000494000 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
FNDC3B-212ENST00000494000 RUNDC1Q96C34 613 aa8.78□□□□□ -1
FNDC3B-212ENST00000494000 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
FNDC3B-212ENST00000494000 STRCQ7RTU9 1775 aa8.77□□□□□ -1
FNDC3B-212ENST00000494000 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
FNDC3B-212ENST00000494000 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-212ENST00000494000 DIAPH1O60610 1272 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-212ENST00000494000 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
FNDC3B-212ENST00000494000 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
FNDC3B-212ENST00000494000 TNNT2P45379 298 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-212ENST00000494000 ATF3P18847 181 aa8.76□□□□□ -1.01
FNDC3B-212ENST00000494000 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
FNDC3B-212ENST00000494000 NME9Q86XW9 330 aa8.76□□□□□ -1.01
FNDC3B-212ENST00000494000 NEFMP07197 916 aa8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 MSH6P52701 1360 aa8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 PSMD1Q99460 953 aa8.75□□□□□ -1.01
FNDC3B-212ENST00000494000 MST1RQ04912 1400 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 FCHSD2O94868 740 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 PSME1Q06323 249 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 TMEM94Q12767 1356 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 C1orf167Q5SNV9 1468 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 STRCP1A6NGW2 1772 aa8.74□□□□□ -1.01
FNDC3B-212ENST00000494000 NUTM2FA1L443 756 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 PIK3C2AO00443 1686 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 U2AF1L5P0DN76 240 aaPredicted RBP8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 HSPA2P54652 639 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 U2AF1Q01081 240 aaKnown RBP eCLIP8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 GOLGA2Q08379 1002 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 ESCO1Q5FWF5 840 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 ZNF521Q96K83 1311 aa8.73□□□□□ -1.01
FNDC3B-212ENST00000494000 IQSEC2Q5JU85 1478 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 RTL1A6NKG5 1358 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 KCNH5Q8NCM2 988 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 SECISBP2LQ93073 1101 aaKnown RBP8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 MAPK8IP3Q9UPT6 1336 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 SBNO1A3KN83 1393 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 WDR63Q8IWG1 891 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 FLT4P35916 1363 aa8.72□□□□□ -1.01
FNDC3B-212ENST00000494000 E9PSI1 815 aa8.71□□□□□ -1.01
FNDC3B-212ENST00000494000 APAF1O14727 1248 aa8.71□□□□□ -1.02
FNDC3B-212ENST00000494000 NLRP6P59044 892 aa8.71□□□□□ -1.02
FNDC3B-212ENST00000494000 ABTB2Q8N961 1025 aa8.71□□□□□ -1.02
FNDC3B-212ENST00000494000 PHRF1Q9P1Y6 1649 aaKnown RBP8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 IL13P35225 146 aa8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 TRPM3Q9HCF6 1732 aaPredicted RBP8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 NPHP3Q7Z494 1330 aa8.7□□□□□ -1.02
FNDC3B-212ENST00000494000 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 TCP11L2Q8N4U5 519 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 MARF1Q9Y4F3 1742 aaKnown RBP8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 XIRP1Q702N8 1843 aaKnown RBP8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 LMOD3Q0VAK6 560 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 EMILIN1Q9Y6C2 1016 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 IL16Q14005 1332 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 RNF123Q5XPI4 1314 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 SLIT3O75094 1523 aa8.69□□□□□ -1.02
FNDC3B-212ENST00000494000 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 SLFN5Q08AF3 891 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 WWC1Q8IX03 1113 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 TRMT2AQ8IZ69 625 aaKnown RBP8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 CHMP4BQ9H444 224 aaKnown RBP8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 ZRANB1Q9UGI0 708 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 ARHGEF10O15013 1369 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 AMPHP49418 695 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 MAPK8IP2Q13387 824 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms