RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 SIL1Q9H173 461 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 EVA1CP58658 441 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 CHRNA2Q15822 529 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
COL2A1-208ENST00000493991 JARID2Q92833 1246 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-208ENST00000493991 PIP4K2AP48426 406 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-208ENST00000493991 DDX54Q8TDD1 881 aaKnown RBP13.56□□□□□ -0.24
COL2A1-208ENST00000493991 PREX2Q70Z35 1606 aa13.56□□□□□ -0.24
COL2A1-208ENST00000493991 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
COL2A1-208ENST00000493991 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
COL2A1-208ENST00000493991 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
COL2A1-208ENST00000493991 MEIS3Q99687 375 aa13.56□□□□□ -0.24
COL2A1-208ENST00000493991 HSPA2P54652 639 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 PIK3C2GO75747 1445 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 MPNDQ8N594 471 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
COL2A1-208ENST00000493991 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 MCCP23508 829 aa13.55□□□□□ -0.24
COL2A1-208ENST00000493991 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-208ENST00000493991 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 NPHP1O15259 732 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 VAMP4O75379 141 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 MSNP26038 577 aaKnown RBP13.54□□□□□ -0.24
COL2A1-208ENST00000493991 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
COL2A1-208ENST00000493991 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 METP08581 1390 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 CDC42BPBQ9Y5S2 1711 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-208ENST00000493991 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
COL2A1-208ENST00000493991 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
COL2A1-208ENST00000493991 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
COL2A1-208ENST00000493991 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
COL2A1-208ENST00000493991 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.24
COL2A1-208ENST00000493991 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.24
COL2A1-208ENST00000493991 G2E3Q7L622 706 aa13.52□□□□□ -0.25
COL2A1-208ENST00000493991 EYA1Q99502 592 aa13.52□□□□□ -0.25
COL2A1-208ENST00000493991 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
COL2A1-208ENST00000493991 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
COL2A1-208ENST00000493991 GORABQ5T7V8 394 aa13.52□□□□□ -0.25
COL2A1-208ENST00000493991 GBP4Q96PP9 640 aa13.52□□□□□ -0.25
COL2A1-208ENST00000493991 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 SRGAP3O43295 1099 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 TRAK2O60296 914 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 GNAI2P04899 355 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 CDC45O75419 566 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
COL2A1-208ENST00000493991 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
COL2A1-208ENST00000493991 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
COL2A1-208ENST00000493991 DTNBO60941 627 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 NEK4P51957 841 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-208ENST00000493991 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
COL2A1-208ENST00000493991 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 ST18O60284 1047 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
COL2A1-208ENST00000493991 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-208ENST00000493991 IL13P35225 146 aa13.5□□□□□ -0.25
COL2A1-208ENST00000493991 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-208ENST00000493991 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-208ENST00000493991 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
COL2A1-208ENST00000493991 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
COL2A1-208ENST00000493991 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 ZNF521Q96K83 1311 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 BLMP54132 1417 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-208ENST00000493991 FOSBP53539 338 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 NEXNQ0ZGT2 675 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-208ENST00000493991 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 CHMP5Q9NZZ3 219 aa13.49□□□□□ -0.25
COL2A1-208ENST00000493991 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
COL2A1-208ENST00000493991 FLIIQ13045 1269 aa13.48□□□□□ -0.25
COL2A1-208ENST00000493991 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
COL2A1-208ENST00000493991 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
COL2A1-208ENST00000493991 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
COL2A1-208ENST00000493991 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
COL2A1-208ENST00000493991 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
COL2A1-208ENST00000493991 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 NSD2O96028 1365 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 REC8O95072 547 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 GNAI3P08754 354 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 FAM43AQ8N2R8 423 aa13.47□□□□□ -0.25
COL2A1-208ENST00000493991 MCTP1Q6DN14 999 aa13.46□□□□□ -0.25
COL2A1-208ENST00000493991 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.25
COL2A1-208ENST00000493991 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
COL2A1-208ENST00000493991 G3BP1Q13283 466 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL2A1-208ENST00000493991 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
COL2A1-208ENST00000493991 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms