RNA–Protein interactions for RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
SNHG16-202ENST00000493536 WDR63Q8IWG1 891 aa11.51□□□□□ -0.57
SNHG16-202ENST00000493536 RIPK4P57078 832 aa11.5□□□□□ -0.57
SNHG16-202ENST00000493536 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
SNHG16-202ENST00000493536 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
SNHG16-202ENST00000493536 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
SNHG16-202ENST00000493536 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
SNHG16-202ENST00000493536 USP54Q70EL1 1684 aa11.5□□□□□ -0.57
SNHG16-202ENST00000493536 XIRP1Q702N8 1843 aaKnown RBP11.5□□□□□ -0.57
SNHG16-202ENST00000493536 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
SNHG16-202ENST00000493536 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
SNHG16-202ENST00000493536 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
SNHG16-202ENST00000493536 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 ERICH6BQ5W0A0 696 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
SNHG16-202ENST00000493536 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 HOXC9P31274 260 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 PHACTR3Q96KR7 559 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 KIF24Q5T7B8 1368 aa11.48□□□□□ -0.57
SNHG16-202ENST00000493536 RRP1P56182 461 aaKnown RBP11.47□□□□□ -0.57
SNHG16-202ENST00000493536 DDX17Q92841 729 aaKnown RBP11.47□□□□□ -0.57
SNHG16-202ENST00000493536 MYH16Q9H6N6 1097 aa11.47□□□□□ -0.57
SNHG16-202ENST00000493536 LTN1O94822 1766 aa11.47□□□□□ -0.57
SNHG16-202ENST00000493536 NFE2L2Q16236 605 aa11.47□□□□□ -0.57
SNHG16-202ENST00000493536 GCP02774 474 aa11.46□□□□□ -0.57
SNHG16-202ENST00000493536 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
SNHG16-202ENST00000493536 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
SNHG16-202ENST00000493536 TRIM35Q9UPQ4 493 aa11.46□□□□□ -0.57
SNHG16-202ENST00000493536 TRPM3Q9HCF6 1732 aaPredicted RBP11.46□□□□□ -0.57
SNHG16-202ENST00000493536 SLAIN2Q9P270 581 aa11.46□□□□□ -0.58
SNHG16-202ENST00000493536 RTL1A6NKG5 1358 aa11.45□□□□□ -0.58
SNHG16-202ENST00000493536 ARHGEF10O15013 1369 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 BRINP3Q76B58 766 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 IP6K1Q92551 441 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 EYA1Q99502 592 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 NFAT5O94916 1531 aa11.44□□□□□ -0.58
SNHG16-202ENST00000493536 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
SNHG16-202ENST00000493536 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.44□□□□□ -0.58
SNHG16-202ENST00000493536 RGPD1P0DJD0 1748 aa11.43□□□□□ -0.58
SNHG16-202ENST00000493536 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
SNHG16-202ENST00000493536 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
SNHG16-202ENST00000493536 PLIN1O60240 522 aa11.43□□□□□ -0.58
SNHG16-202ENST00000493536 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
SNHG16-202ENST00000493536 USP19O94966 1318 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 IL16Q14005 1332 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 DLG5Q8TDM6 1919 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 ALS2Q96Q42 1657 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 TSR2Q969E8 191 aaKnown RBP11.42□□□□□ -0.58
SNHG16-202ENST00000493536 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 SLIT3O75094 1523 aa11.42□□□□□ -0.58
SNHG16-202ENST00000493536 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
SNHG16-202ENST00000493536 TNS3Q68CZ2 1445 aa11.41□□□□□ -0.58
SNHG16-202ENST00000493536 ZC3H6P61129 1189 aaKnown RBP11.41□□□□□ -0.58
SNHG16-202ENST00000493536 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
SNHG16-202ENST00000493536 THUMPD2Q9BTF0 503 aaKnown RBP11.4□□□□□ -0.58
SNHG16-202ENST00000493536 SPATA31A3Q5VYP0 1347 aa11.4□□□□□ -0.58
SNHG16-202ENST00000493536 KDRP35968 1356 aa11.4□□□□□ -0.58
SNHG16-202ENST00000493536 PXDNQ92626 1479 aa11.4□□□□□ -0.58
SNHG16-202ENST00000493536 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
SNHG16-202ENST00000493536 PHRF1Q9P1Y6 1649 aaKnown RBP11.39□□□□□ -0.59
SNHG16-202ENST00000493536 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
SNHG16-202ENST00000493536 BCAR3O75815 825 aa11.39□□□□□ -0.59
SNHG16-202ENST00000493536 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
SNHG16-202ENST00000493536 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
SNHG16-202ENST00000493536 GNAI1P63096 354 aa11.38□□□□□ -0.59
SNHG16-202ENST00000493536 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
SNHG16-202ENST00000493536 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
SNHG16-202ENST00000493536 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
SNHG16-202ENST00000493536 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
SNHG16-202ENST00000493536 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
SNHG16-202ENST00000493536 MTHFSDQ2M296 383 aaKnown RBP11.38□□□□□ -0.59
SNHG16-202ENST00000493536 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
SNHG16-202ENST00000493536 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
SNHG16-202ENST00000493536 CT47B1P0C2W7 299 aaPredicted RBP11.37□□□□□ -0.59
SNHG16-202ENST00000493536 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 ANKRD24Q8TF21 1146 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 IFT57Q9NWB7 429 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 RARSP54136 660 aaKnown RBP11.37□□□□□ -0.59
SNHG16-202ENST00000493536 MCM10Q7L590 875 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 EXOC6Q8TAG9 804 aa11.37□□□□□ -0.59
SNHG16-202ENST00000493536 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
SNHG16-202ENST00000493536 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
SNHG16-202ENST00000493536 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
SNHG16-202ENST00000493536 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
SNHG16-202ENST00000493536 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
SNHG16-202ENST00000493536 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
SNHG16-202ENST00000493536 RGPD2P0DJD1 1756 aa11.35□□□□□ -0.59
SNHG16-202ENST00000493536 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
SNHG16-202ENST00000493536 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
SNHG16-202ENST00000493536 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
SNHG16-202ENST00000493536 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
SNHG16-202ENST00000493536 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
SNHG16-202ENST00000493536 CSB-PGBD3P0DP91 1061 aa11.34□□□□□ -0.59
SNHG16-202ENST00000493536 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
SNHG16-202ENST00000493536 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
SNHG16-202ENST00000493536 ERBB3P21860 1342 aa11.33□□□□□ -0.6
SNHG16-202ENST00000493536 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms