RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 ALKQ9UM73 1620 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 KIF16BQ96L93 1317 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 C8orf37Q96NL8 207 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 PIK3C2BO00750 1634 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 FLT4P35916 1363 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 ZKSCAN2Q63HK3 967 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
NF1-215ENST00000493220 PLEKHG3A1L390 1219 aa7.9□□□□□ -1.15
NF1-215ENST00000493220 NFE2L2Q16236 605 aa7.9□□□□□ -1.15
NF1-215ENST00000493220 WDR63Q8IWG1 891 aa7.9□□□□□ -1.15
NF1-215ENST00000493220 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.15
NF1-215ENST00000493220 A0A1W2PP64 1363 aa7.9□□□□□ -1.15
NF1-215ENST00000493220 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
NF1-215ENST00000493220 TCP11L2Q8N4U5 519 aa7.89□□□□□ -1.15
NF1-215ENST00000493220 CT47B1P0C2W7 299 aaPredicted RBP7.89□□□□□ -1.15
NF1-215ENST00000493220 ATP7BP35670 1465 aa7.89□□□□□ -1.15
NF1-215ENST00000493220 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
NF1-215ENST00000493220 FRMPD1Q5SYB0 1578 aa7.89□□□□□ -1.15
NF1-215ENST00000493220 BTBD11A6QL63 1104 aa7.89□□□□□ -1.15
NF1-215ENST00000493220 IRX6P78412 446 aaPredicted RBP7.88□□□□□ -1.15
NF1-215ENST00000493220 HSP90AA1P07900 732 aaKnown RBP7.88□□□□□ -1.15
NF1-215ENST00000493220 IFNL2Q8IZJ0 200 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 TESK2Q96S53 571 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 MROH2AA6NES4 1674 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 STARD3NLO95772 234 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 EMILIN1Q9Y6C2 1016 aa7.88□□□□□ -1.15
NF1-215ENST00000493220 PTCH1Q13635 1447 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 ADGRL3Q9HAR2 1447 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 ZNF335Q9H4Z2 1342 aaPredicted RBP7.87□□□□□ -1.15
NF1-215ENST00000493220 FYB1O15117 783 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 KIF13AQ9H1H9 1805 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 ROBO2Q9HCK4 1378 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 C9orf78Q9NZ63 289 aaPredicted RBP7.87□□□□□ -1.15
NF1-215ENST00000493220 PLEKHH1Q9ULM0 1364 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 GCP02774 474 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 NEURL4Q96JN8 1562 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 TEX13AQ9BXU3 409 aaPredicted RBP7.87□□□□□ -1.15
NF1-215ENST00000493220 NKTRP30414 1462 aaKnown RBP7.87□□□□□ -1.15
NF1-215ENST00000493220 VWDEQ8N2E2 1590 aa7.87□□□□□ -1.15
NF1-215ENST00000493220 SBNO1A3KN83 1393 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 AAMPQ13685 434 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 IP6K1Q92551 441 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 ORAI2Q96SN7 254 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 DLC1Q96QB1 1528 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 IL2RBP14784 551 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 FKBP5Q13451 457 aaPredicted RBP7.86□□□□□ -1.15
NF1-215ENST00000493220 NPC1L1Q9UHC9 1359 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 HTATSF1O43719 755 aaKnown RBP7.86□□□□□ -1.15
NF1-215ENST00000493220 CHRNA2Q15822 529 aa7.86□□□□□ -1.15
NF1-215ENST00000493220 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
NF1-215ENST00000493220 ELL2O00472 640 aaPredicted RBP7.85□□□□□ -1.15
NF1-215ENST00000493220 ZNF526Q8TF50 670 aaPredicted RBP7.85□□□□□ -1.15
NF1-215ENST00000493220 SMARCC1Q92922 1105 aaPredicted RBP7.85□□□□□ -1.15
NF1-215ENST00000493220 IFT57Q9NWB7 429 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 DDX19BQ9UMR2 479 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 PCDH11XQ9BZA7 1347 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 PCDH11YQ9BZA8 1340 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 ZNF428Q96B54 188 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 DDB1Q16531 1140 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 ZNF772Q68DY9 489 aaPredicted RBP7.85□□□□□ -1.15
NF1-215ENST00000493220 CERKQ8TCT0 537 aa7.85□□□□□ -1.15
NF1-215ENST00000493220 TRPM1Q7Z4N2 1603 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 A0A087WZG4 1122 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 HOXC9P31274 260 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 TAF7Q15545 349 aaPredicted RBP7.84□□□□□ -1.15
NF1-215ENST00000493220 MCCP23508 829 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 TWISTNBQ3B726 338 aaPredicted RBP7.84□□□□□ -1.15
NF1-215ENST00000493220 USHBP1Q8N6Y0 703 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 TMPOP42166 694 aaKnown RBP7.84□□□□□ -1.15
NF1-215ENST00000493220 WWC1Q8IX03 1113 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 NAP1L5Q96NT1 182 aaPredicted RBP7.84□□□□□ -1.15
NF1-215ENST00000493220 BTG4Q9NY30 223 aa7.84□□□□□ -1.15
NF1-215ENST00000493220 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.16
NF1-215ENST00000493220 BRD2P25440 801 aaKnown RBP7.83□□□□□ -1.16
NF1-215ENST00000493220 HSP90AB4PQ58FF6 505 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 TULP4Q9NRJ4 1543 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 RTL1A6NKG5 1358 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 LRRFIP1Q32MZ4 808 aaKnown RBP7.83□□□□□ -1.16
NF1-215ENST00000493220 AKAP4Q5JQC9 854 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 HDGFL1Q5TGJ6 251 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 UBE2Q2Q8WVN8 375 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 USP21Q9UK80 565 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 PTMSP20962 102 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 KCNJ4P48050 445 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
NF1-215ENST00000493220 CPS1P31327 1500 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 TMEM132AQ24JP5 1023 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 MYO3AQ8NEV4 1616 aa7.83□□□□□ -1.16
NF1-215ENST00000493220 CABLES1Q8TDN4 633 aa7.82□□□□□ -1.16
NF1-215ENST00000493220 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
NF1-215ENST00000493220 FRAT2O75474 233 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms