RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 RBM33Q96EV2 1170 aaKnown RBP18.25■□□□□ 0.51
PTPN7-216ENST00000492977 HMOX1P09601 288 aa18.24■□□□□ 0.51
PTPN7-216ENST00000492977 NLRP6P59044 892 aa18.24■□□□□ 0.51
PTPN7-216ENST00000492977 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
PTPN7-216ENST00000492977 CT47B1P0C2W7 299 aaPredicted RBP18.23■□□□□ 0.51
PTPN7-216ENST00000492977 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
PTPN7-216ENST00000492977 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
PTPN7-216ENST00000492977 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
PTPN7-216ENST00000492977 MAP3K19Q56UN5 1328 aa18.22■□□□□ 0.51
PTPN7-216ENST00000492977 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
PTPN7-216ENST00000492977 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 FLT4P35916 1363 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 BCAR3O75815 825 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
PTPN7-216ENST00000492977 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-216ENST00000492977 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
PTPN7-216ENST00000492977 PSME1Q06323 249 aa18.2■□□□□ 0.5
PTPN7-216ENST00000492977 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
PTPN7-216ENST00000492977 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
PTPN7-216ENST00000492977 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
PTPN7-216ENST00000492977 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
PTPN7-216ENST00000492977 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
PTPN7-216ENST00000492977 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
PTPN7-216ENST00000492977 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
PTPN7-216ENST00000492977 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
PTPN7-216ENST00000492977 SOX12O15370 315 aa18.18■□□□□ 0.5
PTPN7-216ENST00000492977 AMPHP49418 695 aa18.18■□□□□ 0.5
PTPN7-216ENST00000492977 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
PTPN7-216ENST00000492977 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
PTPN7-216ENST00000492977 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
PTPN7-216ENST00000492977 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
PTPN7-216ENST00000492977 DCCP43146 1447 aa18.14■□□□□ 0.5
PTPN7-216ENST00000492977 NUTM2GQ5VZR2 741 aa18.14■□□□□ 0.49
PTPN7-216ENST00000492977 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
PTPN7-216ENST00000492977 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
PTPN7-216ENST00000492977 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.49
PTPN7-216ENST00000492977 KIF1AQ12756 1690 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 HSPA2P54652 639 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 EXOSC9Q06265 439 aaKnown RBP18.13■□□□□ 0.49
PTPN7-216ENST00000492977 AEBP1Q8IUX7 1158 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 STRCP1A6NGW2 1772 aa18.13■□□□□ 0.49
PTPN7-216ENST00000492977 TMEM94Q12767 1356 aa18.12■□□□□ 0.49
PTPN7-216ENST00000492977 ATF3P18847 181 aa18.12■□□□□ 0.49
PTPN7-216ENST00000492977 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
PTPN7-216ENST00000492977 HOXC9P31274 260 aa18.12■□□□□ 0.49
PTPN7-216ENST00000492977 GNAI1P63096 354 aa18.12■□□□□ 0.49
PTPN7-216ENST00000492977 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
PTPN7-216ENST00000492977 KDRP35968 1356 aa18.11■□□□□ 0.49
PTPN7-216ENST00000492977 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
PTPN7-216ENST00000492977 FOXO3O43524 673 aa18.11■□□□□ 0.49
PTPN7-216ENST00000492977 LMTK3Q96Q04 1460 aa18.1■□□□□ 0.49
PTPN7-216ENST00000492977 ZNF853P0CG23 659 aa18.1■□□□□ 0.49
PTPN7-216ENST00000492977 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
PTPN7-216ENST00000492977 EYA1Q99502 592 aa18.09■□□□□ 0.49
PTPN7-216ENST00000492977 NFAT5O94916 1531 aa18.09■□□□□ 0.49
PTPN7-216ENST00000492977 MST1RQ04912 1400 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 AAMPQ13685 434 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 IP6K1Q92551 441 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 FRAT1Q92837 279 aaPredicted RBP18.08■□□□□ 0.48
PTPN7-216ENST00000492977 CFAP44Q96MT7 982 aa18.08■□□□□ 0.48
PTPN7-216ENST00000492977 TRPM3Q9HCF6 1732 aaPredicted RBP18.07■□□□□ 0.48
PTPN7-216ENST00000492977 MS4A1P11836 297 aa18.07■□□□□ 0.48
PTPN7-216ENST00000492977 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
PTPN7-216ENST00000492977 LTN1O94822 1766 aa18.07■□□□□ 0.48
PTPN7-216ENST00000492977 STRCQ7RTU9 1775 aa18.06■□□□□ 0.48
PTPN7-216ENST00000492977 ALDH1L2Q3SY69 923 aa18.06■□□□□ 0.48
PTPN7-216ENST00000492977 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
PTPN7-216ENST00000492977 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
PTPN7-216ENST00000492977 BCL2L13Q9BXK5 485 aa18.05■□□□□ 0.48
PTPN7-216ENST00000492977 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
PTPN7-216ENST00000492977 SLIT3O75094 1523 aa18.05■□□□□ 0.48
PTPN7-216ENST00000492977 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 SSH1Q8WYL5 1049 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 MSH6P52701 1360 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 MBIPQ9NS73 344 aa18.04■□□□□ 0.48
PTPN7-216ENST00000492977 USP19O94966 1318 aa18.03■□□□□ 0.48
PTPN7-216ENST00000492977 GCP02774 474 aa18.03■□□□□ 0.48
PTPN7-216ENST00000492977 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-216ENST00000492977 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-216ENST00000492977 CENPQQ7L2Z9 268 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-216ENST00000492977 COG6Q9Y2V7 657 aa18.02■□□□□ 0.48
PTPN7-216ENST00000492977 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.47
PTPN7-216ENST00000492977 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
PTPN7-216ENST00000492977 HTATSF1O43719 755 aaKnown RBP18.01■□□□□ 0.47
PTPN7-216ENST00000492977 VAMP4O75379 141 aa18.01■□□□□ 0.47
PTPN7-216ENST00000492977 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
PTPN7-216ENST00000492977 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
PTPN7-216ENST00000492977 ARHGEF25Q86VW2 580 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms