RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
PABPC4-216ENST00000492468 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
PABPC4-216ENST00000492468 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
PABPC4-216ENST00000492468 UQCRHP07919 91 aa18.29■□□□□ 0.52
PABPC4-216ENST00000492468 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
PABPC4-216ENST00000492468 FAM13BQ9NYF5 915 aa18.29■□□□□ 0.52
PABPC4-216ENST00000492468 CDC42BPGQ6DT37 1551 aa18.28■□□□□ 0.52
PABPC4-216ENST00000492468 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
PABPC4-216ENST00000492468 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
PABPC4-216ENST00000492468 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
PABPC4-216ENST00000492468 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
PABPC4-216ENST00000492468 GSPT1P15170 499 aaKnown RBP18.27■□□□□ 0.52
PABPC4-216ENST00000492468 MTERF4Q7Z6M4 381 aaKnown RBP18.27■□□□□ 0.52
PABPC4-216ENST00000492468 DYNC1I1O14576 645 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 C1orf115Q9H7X2 142 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
PABPC4-216ENST00000492468 GPT2Q8TD30 523 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
PABPC4-216ENST00000492468 PKP1Q13835 747 aa18.25■□□□□ 0.51
PABPC4-216ENST00000492468 TMEM132EQ6IEE7 984 aa18.25■□□□□ 0.51
PABPC4-216ENST00000492468 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
PABPC4-216ENST00000492468 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
PABPC4-216ENST00000492468 ABCC4O15439 1325 aa18.24■□□□□ 0.51
PABPC4-216ENST00000492468 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
PABPC4-216ENST00000492468 LRSAM1Q6UWE0 723 aa18.24■□□□□ 0.51
PABPC4-216ENST00000492468 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
PABPC4-216ENST00000492468 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
PABPC4-216ENST00000492468 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 SASS6Q6UVJ0 657 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 USP26Q9BXU7 913 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
PABPC4-216ENST00000492468 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
PABPC4-216ENST00000492468 YEATS2Q9ULM3 1422 aa18.22■□□□□ 0.51
PABPC4-216ENST00000492468 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
PABPC4-216ENST00000492468 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.51
PABPC4-216ENST00000492468 TMEM63CQ9P1W3 806 aa18.21■□□□□ 0.51
PABPC4-216ENST00000492468 KIDINS220Q9ULH0 1771 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 VAMP4O75379 141 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 TTC22Q5TAA0 569 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
PABPC4-216ENST00000492468 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
PABPC4-216ENST00000492468 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
PABPC4-216ENST00000492468 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
PABPC4-216ENST00000492468 NPATQ14207 1427 aa18.18■□□□□ 0.5
PABPC4-216ENST00000492468 KIF20BQ96Q89 1820 aa18.18■□□□□ 0.5
PABPC4-216ENST00000492468 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
PABPC4-216ENST00000492468 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
PABPC4-216ENST00000492468 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
PABPC4-216ENST00000492468 SYCE3A1L190 88 aa18.17■□□□□ 0.5
PABPC4-216ENST00000492468 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
PABPC4-216ENST00000492468 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
PABPC4-216ENST00000492468 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
PABPC4-216ENST00000492468 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
PABPC4-216ENST00000492468 ST18O60284 1047 aa18.16■□□□□ 0.5
PABPC4-216ENST00000492468 FCHSD2O94868 740 aa18.16■□□□□ 0.5
PABPC4-216ENST00000492468 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
PABPC4-216ENST00000492468 FYB1O15117 783 aa18.16■□□□□ 0.5
PABPC4-216ENST00000492468 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
PABPC4-216ENST00000492468 MBD3O95983 291 aa18.15■□□□□ 0.5
PABPC4-216ENST00000492468 NEXMIFQ5QGS0 1516 aa18.15■□□□□ 0.5
PABPC4-216ENST00000492468 FRMPD1Q5SYB0 1578 aa18.15■□□□□ 0.5
PABPC4-216ENST00000492468 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
PABPC4-216ENST00000492468 HECW2Q9P2P5 1572 aa18.13■□□□□ 0.49
PABPC4-216ENST00000492468 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
PABPC4-216ENST00000492468 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
PABPC4-216ENST00000492468 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
PABPC4-216ENST00000492468 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
PABPC4-216ENST00000492468 CHAMP1Q96JM3 812 aa18.12■□□□□ 0.49
PABPC4-216ENST00000492468 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
PABPC4-216ENST00000492468 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 MYRIPQ8NFW9 859 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 SDSP20132 328 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 GNAI1P63096 354 aa18.11■□□□□ 0.49
PABPC4-216ENST00000492468 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
PABPC4-216ENST00000492468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.1■□□□□ 0.49
PABPC4-216ENST00000492468 ABCC3O15438 1527 aa18.1■□□□□ 0.49
PABPC4-216ENST00000492468 RNF214Q8ND24 703 aa18.1■□□□□ 0.49
PABPC4-216ENST00000492468 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
PABPC4-216ENST00000492468 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
PABPC4-216ENST00000492468 CASC1Q6TDU7 716 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
PABPC4-216ENST00000492468 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
PABPC4-216ENST00000492468 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 REC8O95072 547 aa18.09■□□□□ 0.49
PABPC4-216ENST00000492468 BRD1O95696 1058 aa18.08■□□□□ 0.48
PABPC4-216ENST00000492468 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms