RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 C14orf37Q86TY3 774 aa17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 ABTB2Q8N961 1025 aa17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
RIPPLY3-203ENST00000490393 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
RIPPLY3-203ENST00000490393 PSME1Q06323 249 aa17.63■□□□□ 0.41
RIPPLY3-203ENST00000490393 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
RIPPLY3-203ENST00000490393 KDM4FA0A1W2PPD8 638 aa17.62■□□□□ 0.41
RIPPLY3-203ENST00000490393 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
RIPPLY3-203ENST00000490393 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
RIPPLY3-203ENST00000490393 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
RIPPLY3-203ENST00000490393 AMPHP49418 695 aa17.6■□□□□ 0.41
RIPPLY3-203ENST00000490393 DCCP43146 1447 aa17.59■□□□□ 0.41
RIPPLY3-203ENST00000490393 ZNF853P0CG23 659 aa17.58■□□□□ 0.41
RIPPLY3-203ENST00000490393 ORAI2Q96SN7 254 aa17.58■□□□□ 0.41
RIPPLY3-203ENST00000490393 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.4
RIPPLY3-203ENST00000490393 KDRP35968 1356 aa17.58■□□□□ 0.4
RIPPLY3-203ENST00000490393 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
RIPPLY3-203ENST00000490393 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
RIPPLY3-203ENST00000490393 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
RIPPLY3-203ENST00000490393 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 SOX12O15370 315 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 HOXC9P31274 260 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 KCNH5Q8NCM2 988 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 IGSF1Q8N6C5 1336 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 KIF1AQ12756 1690 aa17.57■□□□□ 0.4
RIPPLY3-203ENST00000490393 GNAI1P63096 354 aa17.56■□□□□ 0.4
RIPPLY3-203ENST00000490393 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
RIPPLY3-203ENST00000490393 MST1RQ04912 1400 aa17.56■□□□□ 0.4
RIPPLY3-203ENST00000490393 AAMPQ13685 434 aa17.56■□□□□ 0.4
RIPPLY3-203ENST00000490393 HSPA2P54652 639 aa17.55■□□□□ 0.4
RIPPLY3-203ENST00000490393 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
RIPPLY3-203ENST00000490393 EYA1Q99502 592 aa17.55■□□□□ 0.4
RIPPLY3-203ENST00000490393 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
RIPPLY3-203ENST00000490393 FOXO3O43524 673 aa17.54■□□□□ 0.4
RIPPLY3-203ENST00000490393 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
RIPPLY3-203ENST00000490393 NFAT5O94916 1531 aa17.54■□□□□ 0.4
RIPPLY3-203ENST00000490393 ATF3P18847 181 aa17.54■□□□□ 0.4
RIPPLY3-203ENST00000490393 IP6K1Q92551 441 aa17.54■□□□□ 0.4
RIPPLY3-203ENST00000490393 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
RIPPLY3-203ENST00000490393 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
RIPPLY3-203ENST00000490393 MS4A1P11836 297 aa17.52■□□□□ 0.4
RIPPLY3-203ENST00000490393 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
RIPPLY3-203ENST00000490393 PHRF1Q9P1Y6 1649 aaKnown RBP17.52■□□□□ 0.4
RIPPLY3-203ENST00000490393 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.4
RIPPLY3-203ENST00000490393 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.39
RIPPLY3-203ENST00000490393 STRCQ7RTU9 1775 aa17.51■□□□□ 0.39
RIPPLY3-203ENST00000490393 CANXP27824 592 aaKnown RBP17.51■□□□□ 0.39
RIPPLY3-203ENST00000490393 SLIT3O75094 1523 aa17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 USP19O94966 1318 aa17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 FRAT1Q92837 279 aaPredicted RBP17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
RIPPLY3-203ENST00000490393 LTN1O94822 1766 aa17.49■□□□□ 0.39
RIPPLY3-203ENST00000490393 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
RIPPLY3-203ENST00000490393 GCP02774 474 aa17.49■□□□□ 0.39
RIPPLY3-203ENST00000490393 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
RIPPLY3-203ENST00000490393 VAMP4O75379 141 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 PANK1Q8TE04 598 aa17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
RIPPLY3-203ENST00000490393 CHL1O00533 1208 aa17.47■□□□□ 0.39
RIPPLY3-203ENST00000490393 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
RIPPLY3-203ENST00000490393 BCL2L13Q9BXK5 485 aa17.47■□□□□ 0.39
RIPPLY3-203ENST00000490393 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
RIPPLY3-203ENST00000490393 MSH6P52701 1360 aa17.47■□□□□ 0.39
RIPPLY3-203ENST00000490393 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
RIPPLY3-203ENST00000490393 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.38
RIPPLY3-203ENST00000490393 RLBP1P12271 317 aa17.45■□□□□ 0.38
RIPPLY3-203ENST00000490393 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
RIPPLY3-203ENST00000490393 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
RIPPLY3-203ENST00000490393 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 CRB1P82279 1406 aa17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
RIPPLY3-203ENST00000490393 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
RIPPLY3-203ENST00000490393 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
RIPPLY3-203ENST00000490393 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
RIPPLY3-203ENST00000490393 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
RIPPLY3-203ENST00000490393 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
RIPPLY3-203ENST00000490393 KIAA0232Q92628 1395 aa17.42■□□□□ 0.38
RIPPLY3-203ENST00000490393 TRIM27P14373 513 aa17.42■□□□□ 0.38
RIPPLY3-203ENST00000490393 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms