RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 ZKSCAN2Q63HK3 967 aa34.04■■■■□ 3.04
KCNC4-207ENST00000489935 ANP32EQ9BTT0 268 aa34.04■■■■□ 3.04
KCNC4-207ENST00000489935 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
KCNC4-207ENST00000489935 ANKLE2Q86XL3 938 aa34.03■■■■□ 3.04
KCNC4-207ENST00000489935 THUMPD2Q9BTF0 503 aaKnown RBP34.03■■■■□ 3.04
KCNC4-207ENST00000489935 CHD2O14647 1828 aaKnown RBP34.01■■■■□ 3.04
KCNC4-207ENST00000489935 LAS1LQ9Y4W2 734 aaKnown RBP34■■■■□ 3.03
KCNC4-207ENST00000489935 AAMPQ13685 434 aa34■■■■□ 3.03
KCNC4-207ENST00000489935 FMN2Q9NZ56 1722 aa33.99■■■■□ 3.03
KCNC4-207ENST00000489935 ANKARQ7Z5J8 1434 aa33.99■■■■□ 3.03
KCNC4-207ENST00000489935 HSP90AB2PQ58FF8 381 aa33.99■■■■□ 3.03
KCNC4-207ENST00000489935 SOX12O15370 315 aa33.98■■■■□ 3.03
KCNC4-207ENST00000489935 AEBP1Q8IUX7 1158 aa33.98■■■■□ 3.03
KCNC4-207ENST00000489935 DZIP1LQ8IYY4 767 aaKnown RBP33.98■■■■□ 3.03
KCNC4-207ENST00000489935 SETD1BQ9UPS6 1966 aaKnown RBP33.97■■■■□ 3.03
KCNC4-207ENST00000489935 MVPQ14764 893 aaKnown RBP33.96■■■■□ 3.03
KCNC4-207ENST00000489935 PCDHB15Q9Y5E8 787 aa33.96■■■■□ 3.03
KCNC4-207ENST00000489935 CALD1Q05682 793 aaKnown RBP33.96■■■■□ 3.03
KCNC4-207ENST00000489935 SULT6B1Q6IMI4 303 aa33.96■■■■□ 3.03
KCNC4-207ENST00000489935 ANP32AP39687 249 aaKnown RBP33.95■■■■□ 3.03
KCNC4-207ENST00000489935 PIK3C2AO00443 1686 aa33.95■■■■□ 3.02
KCNC4-207ENST00000489935 ZNF853P0CG23 659 aa33.94■■■■□ 3.02
KCNC4-207ENST00000489935 TRIM27P14373 513 aa33.94■■■■□ 3.02
KCNC4-207ENST00000489935 NOB1Q9ULX3 412 aaKnown RBP33.94■■■■□ 3.02
KCNC4-207ENST00000489935 IFT57Q9NWB7 429 aa33.94■■■■□ 3.02
KCNC4-207ENST00000489935 FTSJ3Q8IY81 847 aaKnown RBP33.93■■■■□ 3.02
KCNC4-207ENST00000489935 RGPD1P0DJD0 1748 aa33.93■■■■□ 3.02
KCNC4-207ENST00000489935 MAP3K19Q56UN5 1328 aa33.93■■■■□ 3.02
KCNC4-207ENST00000489935 FAM83GA6ND36 823 aa33.92■■■■□ 3.02
KCNC4-207ENST00000489935 GNAI1P63096 354 aa33.92■■■■□ 3.02
KCNC4-207ENST00000489935 ATF7IPQ6VMQ6 1270 aa33.92■■■■□ 3.02
KCNC4-207ENST00000489935 RGS3P49796 1198 aa33.91■■■■□ 3.02
KCNC4-207ENST00000489935 LMOD3Q0VAK6 560 aa33.91■■■■□ 3.02
KCNC4-207ENST00000489935 ALDH1L2Q3SY69 923 aa33.91■■■■□ 3.02
KCNC4-207ENST00000489935 MBIPQ9NS73 344 aa33.89■■■■□ 3.02
KCNC4-207ENST00000489935 IPO9Q96P70 1041 aaKnown RBP33.88■■■■□ 3.01
KCNC4-207ENST00000489935 VAMP4O75379 141 aa33.87■■■■□ 3.01
KCNC4-207ENST00000489935 DCTN1Q14203 1278 aa33.87■■■■□ 3.01
KCNC4-207ENST00000489935 RBM33Q96EV2 1170 aaKnown RBP33.87■■■■□ 3.01
KCNC4-207ENST00000489935 TSPYL6Q8N831 410 aa33.86■■■■□ 3.01
KCNC4-207ENST00000489935 CFAP44Q96MT7 982 aa33.86■■■■□ 3.01
KCNC4-207ENST00000489935 NPM2Q86SE8 214 aaKnown RBP33.85■■■■□ 3.01
KCNC4-207ENST00000489935 ZNF428Q96B54 188 aa33.85■■■■□ 3.01
KCNC4-207ENST00000489935 SBNO1A3KN83 1393 aa33.85■■■■□ 3.01
KCNC4-207ENST00000489935 MARF1Q9Y4F3 1742 aaKnown RBP33.85■■■■□ 3.01
KCNC4-207ENST00000489935 NLRP6P59044 892 aa33.85■■■■□ 3.01
KCNC4-207ENST00000489935 KIF16BQ96L93 1317 aa33.84■■■■□ 3.01
KCNC4-207ENST00000489935 FLT4P35916 1363 aa33.83■■■■□ 3.01
KCNC4-207ENST00000489935 BRPF1P55201 1214 aaPredicted RBP33.83■■■■□ 3.01
KCNC4-207ENST00000489935 IPO8O15397 1037 aaKnown RBP33.82■■■■□ 3
KCNC4-207ENST00000489935 C8orf34Q49A92 452 aa33.81■■■■□ 3
KCNC4-207ENST00000489935 NUTM2GQ5VZR2 741 aa33.81■■■■□ 3
KCNC4-207ENST00000489935 FAM161AQ3B820 660 aa33.81■■■■□ 3
KCNC4-207ENST00000489935 ERICH6Q7L0X2 663 aa33.81■■■■□ 3
KCNC4-207ENST00000489935 TMEM57Q8N5G2 664 aa33.81■■■■□ 3
KCNC4-207ENST00000489935 ITPRIPQ8IWB1 547 aa33.8■■■■□ 3
KCNC4-207ENST00000489935 AMPHP49418 695 aa33.8■■■■□ 3
KCNC4-207ENST00000489935 DDX19BQ9UMR2 479 aa33.8■■■■□ 3
KCNC4-207ENST00000489935 ARHGEF10O15013 1369 aa33.79■■■■□ 3
KCNC4-207ENST00000489935 ELL2O00472 640 aaPredicted RBP33.79■■■■□ 3
KCNC4-207ENST00000489935 NOP58Q9Y2X3 529 aaKnown RBP33.79■■■■□ 3
KCNC4-207ENST00000489935 MRPL50Q8N5N7 158 aaKnown RBP33.78■■■■□ 3
KCNC4-207ENST00000489935 C8orf58Q8NAV2 365 aa33.78■■■■□ 3
KCNC4-207ENST00000489935 RWDD1Q9H446 243 aaPredicted RBP33.78■■■■□ 3
KCNC4-207ENST00000489935 PHF8Q9UPP1 1060 aa33.78■■■■□ 3
KCNC4-207ENST00000489935 USP54Q70EL1 1684 aa33.77■■■■□ 3
KCNC4-207ENST00000489935 NPHP4O75161 1426 aaPredicted RBP33.77■■■■□ 3
KCNC4-207ENST00000489935 PAK3O75914 559 aaPredicted RBP33.77■■■■□ 3
KCNC4-207ENST00000489935 ABTB2Q8N961 1025 aa33.77■■■■□ 3
KCNC4-207ENST00000489935 TWISTNBQ3B726 338 aaPredicted RBP33.76■■■□□ 2.99
KCNC4-207ENST00000489935 EYA1Q99502 592 aa33.74■■■□□ 2.99
KCNC4-207ENST00000489935 ADGRL3Q9HAR2 1447 aa33.73■■■□□ 2.99
KCNC4-207ENST00000489935 MCM10Q7L590 875 aa33.73■■■□□ 2.99
KCNC4-207ENST00000489935 KDRP35968 1356 aa33.71■■■□□ 2.99
KCNC4-207ENST00000489935 IGSF1Q8N6C5 1336 aa33.71■■■□□ 2.99
KCNC4-207ENST00000489935 ZBTB40Q9NUA8 1239 aa33.71■■■□□ 2.99
KCNC4-207ENST00000489935 PDZRN3Q9UPQ7 1066 aa33.71■■■□□ 2.99
KCNC4-207ENST00000489935 HOXC9P31274 260 aa33.69■■■□□ 2.98
KCNC4-207ENST00000489935 ARHGAP45Q92619 1136 aa33.69■■■□□ 2.98
KCNC4-207ENST00000489935 CHL1O00533 1208 aa33.69■■■□□ 2.98
KCNC4-207ENST00000489935 MTHFSDQ2M296 383 aaKnown RBP33.69■■■□□ 2.98
KCNC4-207ENST00000489935 ZBTB47Q9UFB7 747 aaPredicted RBP33.69■■■□□ 2.98
KCNC4-207ENST00000489935 DNAJC5Q9H3Z4 198 aa33.68■■■□□ 2.98
KCNC4-207ENST00000489935 FOXO3O43524 673 aa33.67■■■□□ 2.98
KCNC4-207ENST00000489935 ESCO1Q5FWF5 840 aa33.67■■■□□ 2.98
KCNC4-207ENST00000489935 KIF24Q5T7B8 1368 aa33.67■■■□□ 2.98
KCNC4-207ENST00000489935 HDAC1Q13547 482 aaPredicted RBP33.66■■■□□ 2.98
KCNC4-207ENST00000489935 C14orf37Q86TY3 774 aa33.66■■■□□ 2.98
KCNC4-207ENST00000489935 CRB1P82279 1406 aa33.65■■■□□ 2.98
KCNC4-207ENST00000489935 VIRMAQ69YN4 1812 aaKnown RBP33.63■■■□□ 2.97
KCNC4-207ENST00000489935 KRT24Q2M2I5 525 aa33.62■■■□□ 2.97
KCNC4-207ENST00000489935 NWD1Q149M9 1564 aa33.61■■■□□ 2.97
KCNC4-207ENST00000489935 PSME1Q06323 249 aa33.61■■■□□ 2.97
KCNC4-207ENST00000489935 LTN1O94822 1766 aa33.59■■■□□ 2.97
KCNC4-207ENST00000489935 ZBTB7BO15156 539 aaPredicted RBP33.59■■■□□ 2.97
KCNC4-207ENST00000489935 ABCC4O15439 1325 aa33.58■■■□□ 2.97
KCNC4-207ENST00000489935 KIAA0232Q92628 1395 aa33.56■■■□□ 2.96
KCNC4-207ENST00000489935 LTV1Q96GA3 475 aaPredicted RBP33.56■■■□□ 2.96
KCNC4-207ENST00000489935 ORAI2Q96SN7 254 aa33.56■■■□□ 2.96
KCNC4-207ENST00000489935 GAS2L2Q8NHY3 880 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms