RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	PXDN	Q92626	1479 aa		14.08	□□□□□ -0.16
ITSN1-231	ENST00000489261	EXOC6	Q8TAG9	804 aa		14.08	□□□□□ -0.16
ITSN1-231	ENST00000489261	LRRC59	Q96AG4	307 aa	Known RBP	14.08	□□□□□ -0.16
ITSN1-231	ENST00000489261	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.08	□□□□□ -0.16
ITSN1-231	ENST00000489261	IL13	P35225	146 aa		14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	CALD1	Q05682	793 aa	Known RBP	14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	NEUROD2	Q15784	382 aa		14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	NGDN	Q8NEJ9	315 aa	Known RBP	14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	USP31	Q70CQ4	1352 aa		14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	MARF1	Q9Y4F3	1742 aa	Known RBP	14.07	□□□□□ -0.16
ITSN1-231	ENST00000489261	AAMP	Q13685	434 aa		14.06	□□□□□ -0.16
ITSN1-231	ENST00000489261	PDE3A	Q14432	1141 aa		14.06	□□□□□ -0.16
ITSN1-231	ENST00000489261	PPM1G	O15355	546 aa	Predicted RBP	14.05	□□□□□ -0.16
ITSN1-231	ENST00000489261	RSPH6A	Q9H0K4	717 aa		14.05	□□□□□ -0.16
ITSN1-231	ENST00000489261	RRP7A	Q9Y3A4	280 aa	Known RBP	14.05	□□□□□ -0.16
ITSN1-231	ENST00000489261	RIPK4	P57078	832 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	LMOD3	Q0VAK6	560 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	ESCO1	Q5FWF5	840 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	NPHP3	Q7Z494	1330 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	OVOS2	A0A0J9YW53	1432 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	OVOS2	Q6IE36	1432 aa		14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	MAP2	P11137	1827 aa	Known RBP	14.04	□□□□□ -0.16
ITSN1-231	ENST00000489261	PLIN1	O60240	522 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	MS4A1	P11836	297 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	CRBN	Q96SW2	442 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	ZRANB1	Q9UGI0	708 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	TRIM35	Q9UPQ4	493 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	EMILIN1	Q9Y6C2	1016 aa		14.03	□□□□□ -0.16
ITSN1-231	ENST00000489261	NRK	Q7Z2Y5	1582 aa		14.02	□□□□□ -0.16
ITSN1-231	ENST00000489261	KIF24	Q5T7B8	1368 aa		14.02	□□□□□ -0.17
ITSN1-231	ENST00000489261	PRKAR2B	P31323	418 aa		14.02	□□□□□ -0.17
ITSN1-231	ENST00000489261	NFE2L2	Q16236	605 aa		14.02	□□□□□ -0.17
ITSN1-231	ENST00000489261	POTEA	Q6S8J7	498 aa		14.02	□□□□□ -0.17
ITSN1-231	ENST00000489261	NUTM2F	A1L443	756 aa		14.01	□□□□□ -0.17
ITSN1-231	ENST00000489261	RARS	P54136	660 aa	Known RBP	14.01	□□□□□ -0.17
ITSN1-231	ENST00000489261	ZNF428	Q96B54	188 aa		14.01	□□□□□ -0.17
ITSN1-231	ENST00000489261	ABCA3	Q99758	1704 aa		14.01	□□□□□ -0.17
ITSN1-231	ENST00000489261	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.01	□□□□□ -0.17
ITSN1-231	ENST00000489261	FOXO3	O43524	673 aa		14	□□□□□ -0.17
ITSN1-231	ENST00000489261	PMFBP1	Q8TBY8	1022 aa		14	□□□□□ -0.17
ITSN1-231	ENST00000489261	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	NUTM2E	B1AL46	878 aa	Predicted RBP	13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	FBLN1	P23142	703 aa		13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	RRS1	Q15050	365 aa	Known RBP	13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	MEX3C	Q5U5Q3	659 aa	Known RBP	13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	PHF8	Q9UPP1	1060 aa		13.99	□□□□□ -0.17
ITSN1-231	ENST00000489261	BCAR3	O75815	825 aa		13.98	□□□□□ -0.17
ITSN1-231	ENST00000489261	ALS2	Q96Q42	1657 aa		13.98	□□□□□ -0.17
ITSN1-231	ENST00000489261	TCERG1	O14776	1098 aa	Known RBP	13.97	□□□□□ -0.17
ITSN1-231	ENST00000489261	CANX	P27824	592 aa	Known RBP	13.97	□□□□□ -0.17
ITSN1-231	ENST00000489261	ZNF772	Q68DY9	489 aa	Predicted RBP	13.97	□□□□□ -0.17
ITSN1-231	ENST00000489261	SBNO1	A3KN83	1393 aa		13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	FANCI	Q9NVI1	1328 aa		13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	GNAI1	P63096	354 aa		13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	XPC	Q01831	940 aa	Predicted RBP	13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	EIF4A2	Q14240	407 aa	Known RBP	13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	C20orf194	Q5TEA3	1177 aa		13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	RBM19	Q9Y4C8	960 aa	Known RBP	13.96	□□□□□ -0.17
ITSN1-231	ENST00000489261	TNS3	Q68CZ2	1445 aa		13.96	□□□□□ -0.18
ITSN1-231	ENST00000489261	FLT4	P35916	1363 aa		13.96	□□□□□ -0.18
ITSN1-231	ENST00000489261	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	CRYBG1	Q9Y4K1	1723 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	SPATA31A3	Q5VYP0	1347 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	HMOX1	P09601	288 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	NLRP6	P59044	892 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	ALDH1L2	Q3SY69	923 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	IFT57	Q9NWB7	429 aa		13.95	□□□□□ -0.18
ITSN1-231	ENST00000489261	AFF2	P51816	1311 aa		13.94	□□□□□ -0.18
ITSN1-231	ENST00000489261	PHACTR3	Q96KR7	559 aa		13.94	□□□□□ -0.18
ITSN1-231	ENST00000489261	ARHGEF10	O15013	1369 aa		13.94	□□□□□ -0.18
ITSN1-231	ENST00000489261	IPO8	O15397	1037 aa	Known RBP	13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	AMPH	P49418	695 aa		13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	HAP1	P54257	671 aa	Predicted RBP	13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	BRPF1	P55201	1214 aa	Predicted RBP	13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	EXOSC9	Q06265	439 aa	Known RBP	13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	KRT28	Q7Z3Y7	464 aa		13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	ABTB2	Q8N961	1025 aa		13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	USP54	Q70EL1	1684 aa		13.93	□□□□□ -0.18
ITSN1-231	ENST00000489261	MAP3K19	Q56UN5	1328 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	ZNF853	P0CG23	659 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	PSME1	Q06323	249 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	ZKSCAN2	Q63HK3	967 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	SULT6B1	Q6IMI4	303 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	KCNH5	Q8NCM2	988 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	C8orf37	Q96NL8	207 aa		13.92	□□□□□ -0.18
ITSN1-231	ENST00000489261	HSP90AB2P	Q58FF8	381 aa		13.91	□□□□□ -0.18
ITSN1-231	ENST00000489261	CFAP44	Q96MT7	982 aa		13.91	□□□□□ -0.18
ITSN1-231	ENST00000489261	PLCH1	Q4KWH8	1693 aa		13.91	□□□□□ -0.18
ITSN1-231	ENST00000489261	NWD2	Q9ULI1	1742 aa		13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	HTATSF1	O43719	755 aa	Known RBP	13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	ADAMTS2	O95450	1211 aa		13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	FRAT1	Q92837	279 aa	Predicted RBP	13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	TSR2	Q969E8	191 aa	Known RBP	13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	RTL1	A6NKG5	1358 aa		13.9	□□□□□ -0.18
ITSN1-231	ENST00000489261	KDM2B	Q8NHM5	1336 aa		13.9	□□□□□ -0.19
ITSN1-231	ENST00000489261	PAK3	O75914	559 aa	Predicted RBP	13.89	□□□□□ -0.19
ITSN1-231	ENST00000489261	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.89	□□□□□ -0.19
ITSN1-231	ENST00000489261	CHMP4B	Q9H444	224 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms