RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 NUTM2FA1L443 756 aa19.09■□□□□ 0.65
EPHA1-205ENST00000488068 KCNA6P17658 529 aa19.09■□□□□ 0.65
EPHA1-205ENST00000488068 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
EPHA1-205ENST00000488068 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.65
EPHA1-205ENST00000488068 FRAT1Q92837 279 aaPredicted RBP19.08■□□□□ 0.65
EPHA1-205ENST00000488068 HMOX1P09601 288 aa19.08■□□□□ 0.64
EPHA1-205ENST00000488068 PIK3C2AO00443 1686 aa19.08■□□□□ 0.64
EPHA1-205ENST00000488068 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
EPHA1-205ENST00000488068 LMOD3Q0VAK6 560 aa19.07■□□□□ 0.64
EPHA1-205ENST00000488068 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
EPHA1-205ENST00000488068 PHACTR3Q96KR7 559 aa19.07■□□□□ 0.64
EPHA1-205ENST00000488068 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
EPHA1-205ENST00000488068 COG6Q9Y2V7 657 aa19.05■□□□□ 0.64
EPHA1-205ENST00000488068 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
EPHA1-205ENST00000488068 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
EPHA1-205ENST00000488068 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
EPHA1-205ENST00000488068 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
EPHA1-205ENST00000488068 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
EPHA1-205ENST00000488068 PRKCSHP14314 528 aaPredicted RBP19.03■□□□□ 0.64
EPHA1-205ENST00000488068 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
EPHA1-205ENST00000488068 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
EPHA1-205ENST00000488068 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
EPHA1-205ENST00000488068 PDE4AP27815 886 aa19.02■□□□□ 0.64
EPHA1-205ENST00000488068 SMC4Q9NTJ3 1288 aa19.02■□□□□ 0.64
EPHA1-205ENST00000488068 GNAI1P63096 354 aa19.02■□□□□ 0.64
EPHA1-205ENST00000488068 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
EPHA1-205ENST00000488068 SBNO1A3KN83 1393 aa19.02■□□□□ 0.63
EPHA1-205ENST00000488068 RLBP1P12271 317 aa19.01■□□□□ 0.63
EPHA1-205ENST00000488068 NPHP4O75161 1426 aaPredicted RBP19■□□□□ 0.63
EPHA1-205ENST00000488068 ARHGEF10O15013 1369 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 FLT4P35916 1363 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 BRPF1P55201 1214 aaPredicted RBP19■□□□□ 0.63
EPHA1-205ENST00000488068 SSH1Q8WYL5 1049 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 KIF16BQ96L93 1317 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 ZNF853P0CG23 659 aa19■□□□□ 0.63
EPHA1-205ENST00000488068 MVPQ14764 893 aaKnown RBP19■□□□□ 0.63
EPHA1-205ENST00000488068 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
EPHA1-205ENST00000488068 ADGRL3Q9HAR2 1447 aa18.99■□□□□ 0.63
EPHA1-205ENST00000488068 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
EPHA1-205ENST00000488068 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
EPHA1-205ENST00000488068 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
EPHA1-205ENST00000488068 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
EPHA1-205ENST00000488068 TNNQ9UQP3 1299 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 IGHDP01880 384 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 SULT6B1Q6IMI4 303 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 CFAP44Q96MT7 982 aa18.97■□□□□ 0.63
EPHA1-205ENST00000488068 TRIM27P14373 513 aa18.95■□□□□ 0.62
EPHA1-205ENST00000488068 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
EPHA1-205ENST00000488068 ANO8Q9HCE9 1232 aaPredicted RBP18.95■□□□□ 0.62
EPHA1-205ENST00000488068 AEBP1Q8IUX7 1158 aa18.94■□□□□ 0.62
EPHA1-205ENST00000488068 NOB1Q9ULX3 412 aaKnown RBP18.94■□□□□ 0.62
EPHA1-205ENST00000488068 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
EPHA1-205ENST00000488068 KDRP35968 1356 aa18.94■□□□□ 0.62
EPHA1-205ENST00000488068 DDX19BQ9UMR2 479 aa18.94■□□□□ 0.62
EPHA1-205ENST00000488068 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
EPHA1-205ENST00000488068 NLRP6P59044 892 aa18.93■□□□□ 0.62
EPHA1-205ENST00000488068 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
EPHA1-205ENST00000488068 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
EPHA1-205ENST00000488068 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
EPHA1-205ENST00000488068 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
EPHA1-205ENST00000488068 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
EPHA1-205ENST00000488068 VAMP4O75379 141 aa18.92■□□□□ 0.62
EPHA1-205ENST00000488068 NPM2Q86SE8 214 aaKnown RBP18.92■□□□□ 0.62
EPHA1-205ENST00000488068 AMPHP49418 695 aa18.91■□□□□ 0.62
EPHA1-205ENST00000488068 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
EPHA1-205ENST00000488068 ARHGAP45Q92619 1136 aa18.91■□□□□ 0.62
EPHA1-205ENST00000488068 RWDD1Q9H446 243 aaPredicted RBP18.91■□□□□ 0.62
EPHA1-205ENST00000488068 IGSF1Q8N6C5 1336 aa18.9■□□□□ 0.62
EPHA1-205ENST00000488068 RTL1A6NKG5 1358 aa18.9■□□□□ 0.62
EPHA1-205ENST00000488068 SOX12O15370 315 aa18.9■□□□□ 0.62
EPHA1-205ENST00000488068 LTN1O94822 1766 aa18.9■□□□□ 0.62
EPHA1-205ENST00000488068 FAM161AQ3B820 660 aa18.9■□□□□ 0.62
EPHA1-205ENST00000488068 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
EPHA1-205ENST00000488068 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
EPHA1-205ENST00000488068 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
EPHA1-205ENST00000488068 MRPL50Q8N5N7 158 aaKnown RBP18.88■□□□□ 0.61
EPHA1-205ENST00000488068 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
EPHA1-205ENST00000488068 HAP1P54257 671 aaPredicted RBP18.87■□□□□ 0.61
EPHA1-205ENST00000488068 TWISTNBQ3B726 338 aaPredicted RBP18.87■□□□□ 0.61
EPHA1-205ENST00000488068 ITPRIPQ8IWB1 547 aa18.87■□□□□ 0.61
EPHA1-205ENST00000488068 HOXC9P31274 260 aa18.87■□□□□ 0.61
EPHA1-205ENST00000488068 RGS3P49796 1198 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 TSPYL6Q8N831 410 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 EYA1Q99502 592 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
EPHA1-205ENST00000488068 NFAT5O94916 1531 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
EPHA1-205ENST00000488068 CHL1O00533 1208 aa18.85■□□□□ 0.61
EPHA1-205ENST00000488068 HDAC1Q13547 482 aaPredicted RBP18.85■□□□□ 0.61
EPHA1-205ENST00000488068 DCTN1Q14203 1278 aa18.85■□□□□ 0.61
EPHA1-205ENST00000488068 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
EPHA1-205ENST00000488068 CRB1P82279 1406 aa18.85■□□□□ 0.61
EPHA1-205ENST00000488068 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
EPHA1-205ENST00000488068 GAS2L2Q8NHY3 880 aa18.84■□□□□ 0.61
EPHA1-205ENST00000488068 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
EPHA1-205ENST00000488068 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms